Gene : Phvul.009G159700 P. vulgaris v2.1
Defline:  (1 of 197) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1638
Name:  ? Phvul.009G159700 Secondary Identifier:  ? PAC:37151415
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G159700 0.5kb upstream 0.5kb upstream 3155 true Chr09: 23631228-23634382 Phaseolus vulgaris
Phvul.009G159700 0.5kb upstream 0.5kb upstream 500 false Chr09: 23633883-23634382 Phaseolus vulgaris
Phvul.009G159700 0.5kb downstream 0.5kb downstream 3155 true Chr09: 23630728-23633882 Phaseolus vulgaris
Phvul.009G159700 0.5kb downstream 0.5kb downstream 500 false Chr09: 23630728-23631227 Phaseolus vulgaris
Phvul.009G159700 1.0kb upstream 1.0kb upstream 3655 true Chr09: 23631228-23634882 Phaseolus vulgaris
Phvul.009G159700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23633883-23634882 Phaseolus vulgaris
Phvul.009G159700 1.0kb downstream 1.0kb downstream 3655 true Chr09: 23630228-23633882 Phaseolus vulgaris
Phvul.009G159700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23630228-23631227 Phaseolus vulgaris
Phvul.009G159700 2.0kb upstream 2.0kb upstream 4655 true Chr09: 23631228-23635882 Phaseolus vulgaris
Phvul.009G159700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23633883-23635882 Phaseolus vulgaris
Phvul.009G159700 2.0kb downstream 2.0kb downstream 4655 true Chr09: 23629228-23633882 Phaseolus vulgaris
Phvul.009G159700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23629228-23631227 Phaseolus vulgaris
Phvul.009G159700 5.0kb upstream 5.0kb upstream 7655 true Chr09: 23631228-23638882 Phaseolus vulgaris
Phvul.009G159700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23633883-23638882 Phaseolus vulgaris
Phvul.009G159700 5.0kb downstream 5.0kb downstream 7655 true Chr09: 23626228-23633882 Phaseolus vulgaris
Phvul.009G159700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23626228-23631227 Phaseolus vulgaris
Phvul.009G159700 10.0kb upstream 10.0kb upstream 12655 true Chr09: 23631228-23643882 Phaseolus vulgaris
Phvul.009G159700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23633883-23643882 Phaseolus vulgaris
Phvul.009G159700 10.0kb downstream 10.0kb downstream 12655 true Chr09: 23621228-23633882 Phaseolus vulgaris
Phvul.009G159700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23621228-23631227 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300322 5265 Fabidae View MSA
124074740 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216458 0.0 0.830831 Low  
cufflinks 0.256189 0.0 0.971359 Low High
cufflinks 0.188429 0.0 0.731336 Low  
cufflinks 0.13693 0.0 0.548979 Low  
cufflinks 0.118485 0.0 0.478931 Low Low
cufflinks 0.142682 0.0 0.566844 Low  
cufflinks 0.158385 0.0 0.625357 Low  
cufflinks 0.20136 0.0 0.777281 Low  
cufflinks 0.158194 0.0 0.62604 Low  
cufflinks 0.289779 0.0 1.0871 Low High
cufflinks 0.11452 0.0 0.464363 Low Low

0 Strain