Gene : Phvul.009G149600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  1540
Name:  ? Phvul.009G149600 Secondary Identifier:  ? PAC:37148632
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G149600 0.5kb upstream 0.5kb upstream 11429 true Chr09: 22293839-22305267 Phaseolus vulgaris
Phvul.009G149600 0.5kb upstream 0.5kb upstream 500 false Chr09: 22304768-22305267 Phaseolus vulgaris
Phvul.009G149600 0.5kb downstream 0.5kb downstream 11429 true Chr09: 22293339-22304767 Phaseolus vulgaris
Phvul.009G149600 0.5kb downstream 0.5kb downstream 500 false Chr09: 22293339-22293838 Phaseolus vulgaris
Phvul.009G149600 1.0kb upstream 1.0kb upstream 11929 true Chr09: 22293839-22305767 Phaseolus vulgaris
Phvul.009G149600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22304768-22305767 Phaseolus vulgaris
Phvul.009G149600 1.0kb downstream 1.0kb downstream 11929 true Chr09: 22292839-22304767 Phaseolus vulgaris
Phvul.009G149600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22292839-22293838 Phaseolus vulgaris
Phvul.009G149600 2.0kb upstream 2.0kb upstream 12929 true Chr09: 22293839-22306767 Phaseolus vulgaris
Phvul.009G149600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22304768-22306767 Phaseolus vulgaris
Phvul.009G149600 2.0kb downstream 2.0kb downstream 12929 true Chr09: 22291839-22304767 Phaseolus vulgaris
Phvul.009G149600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22291839-22293838 Phaseolus vulgaris
Phvul.009G149600 5.0kb upstream 5.0kb upstream 15929 true Chr09: 22293839-22309767 Phaseolus vulgaris
Phvul.009G149600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22304768-22309767 Phaseolus vulgaris
Phvul.009G149600 5.0kb downstream 5.0kb downstream 15929 true Chr09: 22288839-22304767 Phaseolus vulgaris
Phvul.009G149600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22288839-22293838 Phaseolus vulgaris
Phvul.009G149600 10.0kb upstream 10.0kb upstream 20929 true Chr09: 22293839-22314767 Phaseolus vulgaris
Phvul.009G149600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22304768-22314767 Phaseolus vulgaris
Phvul.009G149600 10.0kb downstream 10.0kb downstream 20929 true Chr09: 22283839-22304767 Phaseolus vulgaris
Phvul.009G149600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22283839-22293838 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302710 5265 Fabidae View MSA
124066007 5270 Rosid View MSA
123738416 5271 Pentapetalae View MSA
122790727 5272 Eudicot View MSA
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32757 0.0 9.23715   Low
cufflinks 6.61004 0.0 17.3978    
cufflinks 12.5361 0.0 32.4063   High
cufflinks 3.58205 0.0 9.96528    
cufflinks 4.2621 0.0 11.6682    
cufflinks 12.3062 0.0 31.8094   High
cufflinks 5.03463 0.0 13.5127    
cufflinks 5.78301 0.0 15.314    
cufflinks 4.92518 0.0 13.2617    
cufflinks 6.87266 0.0 18.0643    
cufflinks 3.31305 0.0 9.25895   Low

0 Strain