Gene : Phvul.009G150300 P. vulgaris v2.1
Defline:  (1 of 12) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) Genomic Order:  1546
Name:  ? Phvul.009G150300 Secondary Identifier:  ? PAC:37151448
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6773 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G150300 0.5kb upstream 0.5kb upstream 8074 true Chr09: 22364709-22372782 Phaseolus vulgaris
Phvul.009G150300 0.5kb upstream 0.5kb upstream 500 false Chr09: 22372283-22372782 Phaseolus vulgaris
Phvul.009G150300 0.5kb downstream 0.5kb downstream 8074 true Chr09: 22364209-22372282 Phaseolus vulgaris
Phvul.009G150300 0.5kb downstream 0.5kb downstream 500 false Chr09: 22364209-22364708 Phaseolus vulgaris
Phvul.009G150300 1.0kb upstream 1.0kb upstream 8574 true Chr09: 22364709-22373282 Phaseolus vulgaris
Phvul.009G150300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22372283-22373282 Phaseolus vulgaris
Phvul.009G150300 1.0kb downstream 1.0kb downstream 8574 true Chr09: 22363709-22372282 Phaseolus vulgaris
Phvul.009G150300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22363709-22364708 Phaseolus vulgaris
Phvul.009G150300 2.0kb upstream 2.0kb upstream 9574 true Chr09: 22364709-22374282 Phaseolus vulgaris
Phvul.009G150300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22372283-22374282 Phaseolus vulgaris
Phvul.009G150300 2.0kb downstream 2.0kb downstream 9574 true Chr09: 22362709-22372282 Phaseolus vulgaris
Phvul.009G150300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22362709-22364708 Phaseolus vulgaris
Phvul.009G150300 5.0kb upstream 5.0kb upstream 12574 true Chr09: 22364709-22377282 Phaseolus vulgaris
Phvul.009G150300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22372283-22377282 Phaseolus vulgaris
Phvul.009G150300 5.0kb downstream 5.0kb downstream 12574 true Chr09: 22359709-22372282 Phaseolus vulgaris
Phvul.009G150300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22359709-22364708 Phaseolus vulgaris
Phvul.009G150300 10.0kb upstream 10.0kb upstream 17574 true Chr09: 22364709-22382282 Phaseolus vulgaris
Phvul.009G150300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22372283-22382282 Phaseolus vulgaris
Phvul.009G150300 10.0kb downstream 10.0kb downstream 17574 true Chr09: 22354709-22372282 Phaseolus vulgaris
Phvul.009G150300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22354709-22364708 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312912 5265 Fabidae View MSA
124051035 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44679 0.0 4.35184   High
cufflinks 0.0776815 0.0 0.310964 Low  
cufflinks 0.156459 0.0 0.592132 Low  
cufflinks 1.78236 0.0 5.29071   High
cufflinks 0.120574 0.0 0.469833 Low  
cufflinks 0.415151 0.0 1.43752 Low  
cufflinks 0.139821 0.0 0.534858 Low  
cufflinks 0.0456766 0.0 0.190044 Low Low
cufflinks 0.0515087 0.0 0.21365 Low Low
cufflinks 0.222812 0.0 0.820619 Low  
cufflinks 0.122616 0.0 0.475927 Low  

0 Strain