Gene : Phvul.009G153900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Genomic Order:  1580
Name:  ? Phvul.009G153900 Secondary Identifier:  ? PAC:37149837
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G153900 0.5kb upstream 0.5kb upstream 7419 true Chr09: 22830904-22838322 Phaseolus vulgaris
Phvul.009G153900 0.5kb upstream 0.5kb upstream 500 false Chr09: 22837823-22838322 Phaseolus vulgaris
Phvul.009G153900 0.5kb downstream 0.5kb downstream 7419 true Chr09: 22830404-22837822 Phaseolus vulgaris
Phvul.009G153900 0.5kb downstream 0.5kb downstream 500 false Chr09: 22830404-22830903 Phaseolus vulgaris
Phvul.009G153900 1.0kb upstream 1.0kb upstream 7919 true Chr09: 22830904-22838822 Phaseolus vulgaris
Phvul.009G153900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22837823-22838822 Phaseolus vulgaris
Phvul.009G153900 1.0kb downstream 1.0kb downstream 7919 true Chr09: 22829904-22837822 Phaseolus vulgaris
Phvul.009G153900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22829904-22830903 Phaseolus vulgaris
Phvul.009G153900 2.0kb upstream 2.0kb upstream 8919 true Chr09: 22830904-22839822 Phaseolus vulgaris
Phvul.009G153900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22837823-22839822 Phaseolus vulgaris
Phvul.009G153900 2.0kb downstream 2.0kb downstream 8919 true Chr09: 22828904-22837822 Phaseolus vulgaris
Phvul.009G153900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22828904-22830903 Phaseolus vulgaris
Phvul.009G153900 5.0kb upstream 5.0kb upstream 11919 true Chr09: 22830904-22842822 Phaseolus vulgaris
Phvul.009G153900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22837823-22842822 Phaseolus vulgaris
Phvul.009G153900 5.0kb downstream 5.0kb downstream 11919 true Chr09: 22825904-22837822 Phaseolus vulgaris
Phvul.009G153900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22825904-22830903 Phaseolus vulgaris
Phvul.009G153900 10.0kb upstream 10.0kb upstream 16919 true Chr09: 22830904-22847822 Phaseolus vulgaris
Phvul.009G153900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22837823-22847822 Phaseolus vulgaris
Phvul.009G153900 10.0kb downstream 10.0kb downstream 16919 true Chr09: 22820904-22837822 Phaseolus vulgaris
Phvul.009G153900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22820904-22830903 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307627 5265 Fabidae View MSA
124066252 5270 Rosid View MSA
123750036 5271 Pentapetalae View MSA
122789173 5272 Eudicot View MSA
122046022 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1942 0.0 49.6408    
cufflinks 25.0865 0.0 64.9182    
cufflinks 10.1907 0.0 27.0587    
cufflinks 27.104 0.0 70.1501    
cufflinks 26.107 0.0 67.5687    
cufflinks 13.9344 0.0 36.3308    
cufflinks 11.5258 0.0 30.2738    
cufflinks 6.66411 0.0 18.2307   Low
cufflinks 12.0047 0.0 31.5176    
cufflinks 68.3084 0.0 187.919 High High
cufflinks 24.36 0.0 63.0048    

0 Strain