Gene : Phvul.009G142100 P. vulgaris v2.1
Defline:  (1 of 3) K07407 - alpha-galactosidase (E3.2.1.22B, galA, rafA) Genomic Order:  1464
Name:  ? Phvul.009G142100 Secondary Identifier:  ? PAC:37151695
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1301 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6527 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G142100 0.5kb upstream 0.5kb upstream 12360 true Chr09: 21328896-21341255 Phaseolus vulgaris
Phvul.009G142100 0.5kb upstream 0.5kb upstream 500 false Chr09: 21340756-21341255 Phaseolus vulgaris
Phvul.009G142100 0.5kb downstream 0.5kb downstream 12360 true Chr09: 21328396-21340755 Phaseolus vulgaris
Phvul.009G142100 0.5kb downstream 0.5kb downstream 500 false Chr09: 21328396-21328895 Phaseolus vulgaris
Phvul.009G142100 1.0kb upstream 1.0kb upstream 12860 true Chr09: 21328896-21341755 Phaseolus vulgaris
Phvul.009G142100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21340756-21341755 Phaseolus vulgaris
Phvul.009G142100 1.0kb downstream 1.0kb downstream 12860 true Chr09: 21327896-21340755 Phaseolus vulgaris
Phvul.009G142100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21327896-21328895 Phaseolus vulgaris
Phvul.009G142100 2.0kb upstream 2.0kb upstream 13860 true Chr09: 21328896-21342755 Phaseolus vulgaris
Phvul.009G142100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21340756-21342755 Phaseolus vulgaris
Phvul.009G142100 2.0kb downstream 2.0kb downstream 13860 true Chr09: 21326896-21340755 Phaseolus vulgaris
Phvul.009G142100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21326896-21328895 Phaseolus vulgaris
Phvul.009G142100 5.0kb upstream 5.0kb upstream 16860 true Chr09: 21328896-21345755 Phaseolus vulgaris
Phvul.009G142100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21340756-21345755 Phaseolus vulgaris
Phvul.009G142100 5.0kb downstream 5.0kb downstream 16860 true Chr09: 21323896-21340755 Phaseolus vulgaris
Phvul.009G142100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21323896-21328895 Phaseolus vulgaris
Phvul.009G142100 10.0kb upstream 10.0kb upstream 21860 true Chr09: 21328896-21350755 Phaseolus vulgaris
Phvul.009G142100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21340756-21350755 Phaseolus vulgaris
Phvul.009G142100 10.0kb downstream 10.0kb downstream 21860 true Chr09: 21318896-21340755 Phaseolus vulgaris
Phvul.009G142100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21318896-21328895 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304427 5265 Fabidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.933 0.0 54.1968    
cufflinks 21.367 0.0 55.3364    
cufflinks 12.8709 0.0 34.06    
cufflinks 15.1797 0.0 39.9261    
cufflinks 17.2052 0.0 44.9258    
cufflinks 9.22338 0.0 25.0471    
cufflinks 6.44858 0.0 18.0817   Low
cufflinks 4.89344 0.0 14.0516   Low
cufflinks 9.64818 0.0 26.1755    
cufflinks 39.491 0.0 102.828 High High
cufflinks 9.32767 0.0 25.3999    

0 Strain