Gene : Phvul.009G142600 P. vulgaris v2.1
Defline:  (1 of 1) K12585 - exosome complex exonuclease DIS3/RRP44 (DIS3, RRP44) Genomic Order:  1469
Name:  ? Phvul.009G142600 Secondary Identifier:  ? PAC:37151262
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G142600 0.5kb upstream 0.5kb upstream 18028 true Chr09: 21391606-21409633 Phaseolus vulgaris
Phvul.009G142600 0.5kb upstream 0.5kb upstream 500 false Chr09: 21409134-21409633 Phaseolus vulgaris
Phvul.009G142600 0.5kb downstream 0.5kb downstream 18028 true Chr09: 21391106-21409133 Phaseolus vulgaris
Phvul.009G142600 0.5kb downstream 0.5kb downstream 500 false Chr09: 21391106-21391605 Phaseolus vulgaris
Phvul.009G142600 1.0kb upstream 1.0kb upstream 18528 true Chr09: 21391606-21410133 Phaseolus vulgaris
Phvul.009G142600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21409134-21410133 Phaseolus vulgaris
Phvul.009G142600 1.0kb downstream 1.0kb downstream 18528 true Chr09: 21390606-21409133 Phaseolus vulgaris
Phvul.009G142600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21390606-21391605 Phaseolus vulgaris
Phvul.009G142600 2.0kb upstream 2.0kb upstream 19528 true Chr09: 21391606-21411133 Phaseolus vulgaris
Phvul.009G142600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21409134-21411133 Phaseolus vulgaris
Phvul.009G142600 2.0kb downstream 2.0kb downstream 19528 true Chr09: 21389606-21409133 Phaseolus vulgaris
Phvul.009G142600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21389606-21391605 Phaseolus vulgaris
Phvul.009G142600 5.0kb upstream 5.0kb upstream 22528 true Chr09: 21391606-21414133 Phaseolus vulgaris
Phvul.009G142600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21409134-21414133 Phaseolus vulgaris
Phvul.009G142600 5.0kb downstream 5.0kb downstream 22528 true Chr09: 21386606-21409133 Phaseolus vulgaris
Phvul.009G142600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21386606-21391605 Phaseolus vulgaris
Phvul.009G142600 10.0kb upstream 10.0kb upstream 27528 true Chr09: 21391606-21419133 Phaseolus vulgaris
Phvul.009G142600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21409134-21419133 Phaseolus vulgaris
Phvul.009G142600 10.0kb downstream 10.0kb downstream 27528 true Chr09: 21381606-21409133 Phaseolus vulgaris
Phvul.009G142600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21381606-21391605 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305027 5265 Fabidae View MSA
124060472 5270 Rosid View MSA
123737473 5271 Pentapetalae View MSA
122790694 5272 Eudicot View MSA
122043257 5273 Angiosperm View MSA
121346198 5274 Embryophyte View MSA
123425296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.44137 0.0 11.9854   Low
cufflinks 8.33048 0.0 21.6448    
cufflinks 6.57418 0.0 17.2398    
cufflinks 4.05955 0.0 11.1047   Low
cufflinks 7.26452 0.0 19.0453    
cufflinks 7.74964 0.0 20.1825    
cufflinks 10.133 0.0 26.2174    
cufflinks 9.47239 0.0 24.518    
cufflinks 8.72613 0.0 22.658    
cufflinks 13.7952 0.0 35.6966   High
cufflinks 7.44185 0.0 19.4608    

0 Strain