Gene : Phvul.009G142800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  1471
Name:  ? Phvul.009G142800 Secondary Identifier:  ? PAC:37149845
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G142800 0.5kb upstream 0.5kb upstream 2283 true Chr09: 21430380-21432662 Phaseolus vulgaris
Phvul.009G142800 0.5kb upstream 0.5kb upstream 500 false Chr09: 21432163-21432662 Phaseolus vulgaris
Phvul.009G142800 0.5kb downstream 0.5kb downstream 2283 true Chr09: 21429880-21432162 Phaseolus vulgaris
Phvul.009G142800 0.5kb downstream 0.5kb downstream 500 false Chr09: 21429880-21430379 Phaseolus vulgaris
Phvul.009G142800 1.0kb upstream 1.0kb upstream 2783 true Chr09: 21430380-21433162 Phaseolus vulgaris
Phvul.009G142800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21432163-21433162 Phaseolus vulgaris
Phvul.009G142800 1.0kb downstream 1.0kb downstream 2783 true Chr09: 21429380-21432162 Phaseolus vulgaris
Phvul.009G142800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21429380-21430379 Phaseolus vulgaris
Phvul.009G142800 2.0kb upstream 2.0kb upstream 3783 true Chr09: 21430380-21434162 Phaseolus vulgaris
Phvul.009G142800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21432163-21434162 Phaseolus vulgaris
Phvul.009G142800 2.0kb downstream 2.0kb downstream 3783 true Chr09: 21428380-21432162 Phaseolus vulgaris
Phvul.009G142800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21428380-21430379 Phaseolus vulgaris
Phvul.009G142800 5.0kb upstream 5.0kb upstream 6783 true Chr09: 21430380-21437162 Phaseolus vulgaris
Phvul.009G142800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21432163-21437162 Phaseolus vulgaris
Phvul.009G142800 5.0kb downstream 5.0kb downstream 6783 true Chr09: 21425380-21432162 Phaseolus vulgaris
Phvul.009G142800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21425380-21430379 Phaseolus vulgaris
Phvul.009G142800 10.0kb upstream 10.0kb upstream 11783 true Chr09: 21430380-21442162 Phaseolus vulgaris
Phvul.009G142800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21432163-21442162 Phaseolus vulgaris
Phvul.009G142800 10.0kb downstream 10.0kb downstream 11783 true Chr09: 21420380-21432162 Phaseolus vulgaris
Phvul.009G142800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21420380-21430379 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310468 5265 Fabidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.2793 0.0 233.672 High  
cufflinks 46.7728 0.0 146.053 High  
cufflinks 151.273 0.0 561.575 High  
cufflinks 417.985 0.0 1812.29 High High
cufflinks 102.314 0.0 347.703 High  
cufflinks 49.288 0.0 153.285 High  
cufflinks 108.785 0.0 377.64 High  
cufflinks 203.379 0.0 816.744 High  
cufflinks 27.8554 0.0 89.0916   Low
cufflinks 184.224 0.0 716.921 High  
cufflinks 92.0784 0.0 306.374 High  

0 Strain