Gene : Phvul.009G143300 P. vulgaris v2.1
Defline:  (1 of 1) K03926 - periplasmic divalent cation tolerance protein (cutA) Genomic Order:  1476
Name:  ? Phvul.009G143300 Secondary Identifier:  ? PAC:37149345
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G143300 0.5kb upstream 0.5kb upstream 3744 true Chr09: 21507057-21510800 Phaseolus vulgaris
Phvul.009G143300 0.5kb upstream 0.5kb upstream 500 false Chr09: 21507057-21507556 Phaseolus vulgaris
Phvul.009G143300 0.5kb downstream 0.5kb downstream 3744 true Chr09: 21507557-21511300 Phaseolus vulgaris
Phvul.009G143300 0.5kb downstream 0.5kb downstream 500 false Chr09: 21510801-21511300 Phaseolus vulgaris
Phvul.009G143300 1.0kb upstream 1.0kb upstream 4244 true Chr09: 21506557-21510800 Phaseolus vulgaris
Phvul.009G143300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21506557-21507556 Phaseolus vulgaris
Phvul.009G143300 1.0kb downstream 1.0kb downstream 4244 true Chr09: 21507557-21511800 Phaseolus vulgaris
Phvul.009G143300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21510801-21511800 Phaseolus vulgaris
Phvul.009G143300 2.0kb upstream 2.0kb upstream 5244 true Chr09: 21505557-21510800 Phaseolus vulgaris
Phvul.009G143300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21505557-21507556 Phaseolus vulgaris
Phvul.009G143300 2.0kb downstream 2.0kb downstream 5244 true Chr09: 21507557-21512800 Phaseolus vulgaris
Phvul.009G143300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21510801-21512800 Phaseolus vulgaris
Phvul.009G143300 5.0kb upstream 5.0kb upstream 8244 true Chr09: 21502557-21510800 Phaseolus vulgaris
Phvul.009G143300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21502557-21507556 Phaseolus vulgaris
Phvul.009G143300 5.0kb downstream 5.0kb downstream 8244 true Chr09: 21507557-21515800 Phaseolus vulgaris
Phvul.009G143300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21510801-21515800 Phaseolus vulgaris
Phvul.009G143300 10.0kb upstream 10.0kb upstream 13244 true Chr09: 21497557-21510800 Phaseolus vulgaris
Phvul.009G143300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21497557-21507556 Phaseolus vulgaris
Phvul.009G143300 10.0kb downstream 10.0kb downstream 13244 true Chr09: 21507557-21520800 Phaseolus vulgaris
Phvul.009G143300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21510801-21520800 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308861 5265 Fabidae View MSA
124065132 5270 Rosid View MSA
123737980 5271 Pentapetalae View MSA
122793088 5272 Eudicot View MSA
122046469 5273 Angiosperm View MSA
121350937 5274 Embryophyte View MSA
123425667 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.1143 0.0 116.92 High  
cufflinks 51.8858 0.0 159.907 High High
cufflinks 30.2497 0.0 96.9122    
cufflinks 36.8203 0.0 116.231 High  
cufflinks 33.888 0.0 106.587 High  
cufflinks 33.5036 0.0 106.58 High  
cufflinks 22.8926 0.0 77.2757   Low
cufflinks 33.7343 0.0 108.044 High  
cufflinks 21.019 0.0 70.0007   Low
cufflinks 35.7693 0.0 112.307    
cufflinks 46.0466 0.0 142.033 High High

0 Strain