Gene : Phvul.009G145800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED Genomic Order:  1501
Name:  ? Phvul.009G145800 Secondary Identifier:  ? PAC:37151007
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G145800 0.5kb upstream 0.5kb upstream 2447 true Chr09: 21788957-21791403 Phaseolus vulgaris
Phvul.009G145800 0.5kb upstream 0.5kb upstream 500 false Chr09: 21788957-21789456 Phaseolus vulgaris
Phvul.009G145800 0.5kb downstream 0.5kb downstream 2447 true Chr09: 21789457-21791903 Phaseolus vulgaris
Phvul.009G145800 0.5kb downstream 0.5kb downstream 500 false Chr09: 21791404-21791903 Phaseolus vulgaris
Phvul.009G145800 1.0kb upstream 1.0kb upstream 2947 true Chr09: 21788457-21791403 Phaseolus vulgaris
Phvul.009G145800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21788457-21789456 Phaseolus vulgaris
Phvul.009G145800 1.0kb downstream 1.0kb downstream 2947 true Chr09: 21789457-21792403 Phaseolus vulgaris
Phvul.009G145800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21791404-21792403 Phaseolus vulgaris
Phvul.009G145800 2.0kb upstream 2.0kb upstream 3947 true Chr09: 21787457-21791403 Phaseolus vulgaris
Phvul.009G145800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21787457-21789456 Phaseolus vulgaris
Phvul.009G145800 2.0kb downstream 2.0kb downstream 3947 true Chr09: 21789457-21793403 Phaseolus vulgaris
Phvul.009G145800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21791404-21793403 Phaseolus vulgaris
Phvul.009G145800 5.0kb upstream 5.0kb upstream 6947 true Chr09: 21784457-21791403 Phaseolus vulgaris
Phvul.009G145800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21784457-21789456 Phaseolus vulgaris
Phvul.009G145800 5.0kb downstream 5.0kb downstream 6947 true Chr09: 21789457-21796403 Phaseolus vulgaris
Phvul.009G145800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21791404-21796403 Phaseolus vulgaris
Phvul.009G145800 10.0kb upstream 10.0kb upstream 11947 true Chr09: 21779457-21791403 Phaseolus vulgaris
Phvul.009G145800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21779457-21789456 Phaseolus vulgaris
Phvul.009G145800 10.0kb downstream 10.0kb downstream 11947 true Chr09: 21789457-21801403 Phaseolus vulgaris
Phvul.009G145800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21791404-21801403 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310483 5265 Fabidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.376241 0.0 1.43721 Low  
cufflinks 0.187538 0.0 0.756975 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.629674 0.0 2.32546    
cufflinks 0.319588 0.0 1.24532 Low  
cufflinks 0.0565219 0.0 0.253669 Low Low
cufflinks 6.63854 0.0 18.7895   High
cufflinks 31.6416 0.0 81.8144 High High
cufflinks 0.349666 0.0 1.34472 Low  
cufflinks 0.0237322 0.0 0.117143 Low Low
cufflinks 1.16812 0.0 4.04995    

0 Strain