Gene : Phvul.009G127000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR26402//PTHR26402:SF498 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED Genomic Order:  1309
Name:  ? Phvul.009G127000 Secondary Identifier:  ? PAC:37149559
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G127000 0.5kb upstream 0.5kb upstream 3323 true Chr09: 19300472-19303794 Phaseolus vulgaris
Phvul.009G127000 0.5kb upstream 0.5kb upstream 500 false Chr09: 19303295-19303794 Phaseolus vulgaris
Phvul.009G127000 0.5kb downstream 0.5kb downstream 3323 true Chr09: 19299972-19303294 Phaseolus vulgaris
Phvul.009G127000 0.5kb downstream 0.5kb downstream 500 false Chr09: 19299972-19300471 Phaseolus vulgaris
Phvul.009G127000 1.0kb upstream 1.0kb upstream 3823 true Chr09: 19300472-19304294 Phaseolus vulgaris
Phvul.009G127000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19303295-19304294 Phaseolus vulgaris
Phvul.009G127000 1.0kb downstream 1.0kb downstream 3823 true Chr09: 19299472-19303294 Phaseolus vulgaris
Phvul.009G127000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19299472-19300471 Phaseolus vulgaris
Phvul.009G127000 2.0kb upstream 2.0kb upstream 4823 true Chr09: 19300472-19305294 Phaseolus vulgaris
Phvul.009G127000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19303295-19305294 Phaseolus vulgaris
Phvul.009G127000 2.0kb downstream 2.0kb downstream 4823 true Chr09: 19298472-19303294 Phaseolus vulgaris
Phvul.009G127000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19298472-19300471 Phaseolus vulgaris
Phvul.009G127000 5.0kb upstream 5.0kb upstream 7823 true Chr09: 19300472-19308294 Phaseolus vulgaris
Phvul.009G127000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19303295-19308294 Phaseolus vulgaris
Phvul.009G127000 5.0kb downstream 5.0kb downstream 7823 true Chr09: 19295472-19303294 Phaseolus vulgaris
Phvul.009G127000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19295472-19300471 Phaseolus vulgaris
Phvul.009G127000 10.0kb upstream 10.0kb upstream 12823 true Chr09: 19300472-19313294 Phaseolus vulgaris
Phvul.009G127000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19303295-19313294 Phaseolus vulgaris
Phvul.009G127000 10.0kb downstream 10.0kb downstream 12823 true Chr09: 19290472-19303294 Phaseolus vulgaris
Phvul.009G127000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19290472-19300471 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791997 5273 Angiosperm View MSA
122303306 5265 Fabidae View MSA
124070337 5270 Rosid View MSA
123744079 5271 Pentapetalae View MSA
122795833 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.1748 0.0 13.0282    
cufflinks 15.9955 0.0 43.4784   High
cufflinks 23.7111 0.0 62.4014   High
cufflinks 2.38052 0.0 7.94534    
cufflinks 10.7038 0.0 30.3214    
cufflinks 10.0635 0.0 28.4903    
cufflinks 2.45196 0.0 8.118    
cufflinks 5.33633 0.0 16.0892    
cufflinks 0.401432 0.0 1.57571 Low Low
cufflinks 3.67841 0.0 11.6801    
cufflinks 5.14056 0.0 15.7759    

0 Strain