Gene : Phvul.009G127200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11014:SF62 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 Genomic Order:  1311
Name:  ? Phvul.009G127200 Secondary Identifier:  ? PAC:37148986
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G127200 0.5kb upstream 0.5kb upstream 8936 true Chr09: 19330021-19338956 Phaseolus vulgaris
Phvul.009G127200 0.5kb upstream 0.5kb upstream 500 false Chr09: 19338457-19338956 Phaseolus vulgaris
Phvul.009G127200 0.5kb downstream 0.5kb downstream 8936 true Chr09: 19329521-19338456 Phaseolus vulgaris
Phvul.009G127200 0.5kb downstream 0.5kb downstream 500 false Chr09: 19329521-19330020 Phaseolus vulgaris
Phvul.009G127200 1.0kb upstream 1.0kb upstream 9436 true Chr09: 19330021-19339456 Phaseolus vulgaris
Phvul.009G127200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19338457-19339456 Phaseolus vulgaris
Phvul.009G127200 1.0kb downstream 1.0kb downstream 9436 true Chr09: 19329021-19338456 Phaseolus vulgaris
Phvul.009G127200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19329021-19330020 Phaseolus vulgaris
Phvul.009G127200 2.0kb upstream 2.0kb upstream 10436 true Chr09: 19330021-19340456 Phaseolus vulgaris
Phvul.009G127200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19338457-19340456 Phaseolus vulgaris
Phvul.009G127200 2.0kb downstream 2.0kb downstream 10436 true Chr09: 19328021-19338456 Phaseolus vulgaris
Phvul.009G127200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19328021-19330020 Phaseolus vulgaris
Phvul.009G127200 5.0kb upstream 5.0kb upstream 13436 true Chr09: 19330021-19343456 Phaseolus vulgaris
Phvul.009G127200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19338457-19343456 Phaseolus vulgaris
Phvul.009G127200 5.0kb downstream 5.0kb downstream 13436 true Chr09: 19325021-19338456 Phaseolus vulgaris
Phvul.009G127200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19325021-19330020 Phaseolus vulgaris
Phvul.009G127200 10.0kb upstream 10.0kb upstream 18436 true Chr09: 19330021-19348456 Phaseolus vulgaris
Phvul.009G127200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19338457-19348456 Phaseolus vulgaris
Phvul.009G127200 10.0kb downstream 10.0kb downstream 18436 true Chr09: 19320021-19338456 Phaseolus vulgaris
Phvul.009G127200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19320021-19330020 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305115 5265 Fabidae View MSA
124061387 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.67645 0.0 23.3746    
cufflinks 13.2391 0.0 34.66    
cufflinks 5.06942 0.0 14.3682    
cufflinks 22.5549 0.0 58.3015    
cufflinks 43.5542 0.0 114.836 High High
cufflinks 7.29933 0.0 19.9643    
cufflinks 5.30721 0.0 14.8902    
cufflinks 2.36057 0.0 7.25468   Low
cufflinks 7.99242 0.0 21.6525    
cufflinks 7.2864 0.0 19.9034    
cufflinks 31.0642 0.0 80.7275   High

0 Strain