Gene : Phvul.009G133500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  1374
Name:  ? Phvul.009G133500 Secondary Identifier:  ? PAC:37148548
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G133500 0.5kb upstream 0.5kb upstream 1764 true Chr09: 20177688-20179451 Phaseolus vulgaris
Phvul.009G133500 0.5kb upstream 0.5kb upstream 500 false Chr09: 20178952-20179451 Phaseolus vulgaris
Phvul.009G133500 0.5kb downstream 0.5kb downstream 1764 true Chr09: 20177188-20178951 Phaseolus vulgaris
Phvul.009G133500 0.5kb downstream 0.5kb downstream 500 false Chr09: 20177188-20177687 Phaseolus vulgaris
Phvul.009G133500 1.0kb upstream 1.0kb upstream 2264 true Chr09: 20177688-20179951 Phaseolus vulgaris
Phvul.009G133500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 20178952-20179951 Phaseolus vulgaris
Phvul.009G133500 1.0kb downstream 1.0kb downstream 2264 true Chr09: 20176688-20178951 Phaseolus vulgaris
Phvul.009G133500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 20176688-20177687 Phaseolus vulgaris
Phvul.009G133500 2.0kb upstream 2.0kb upstream 3264 true Chr09: 20177688-20180951 Phaseolus vulgaris
Phvul.009G133500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 20178952-20180951 Phaseolus vulgaris
Phvul.009G133500 2.0kb downstream 2.0kb downstream 3264 true Chr09: 20175688-20178951 Phaseolus vulgaris
Phvul.009G133500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 20175688-20177687 Phaseolus vulgaris
Phvul.009G133500 5.0kb upstream 5.0kb upstream 6264 true Chr09: 20177688-20183951 Phaseolus vulgaris
Phvul.009G133500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 20178952-20183951 Phaseolus vulgaris
Phvul.009G133500 5.0kb downstream 5.0kb downstream 6264 true Chr09: 20172688-20178951 Phaseolus vulgaris
Phvul.009G133500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 20172688-20177687 Phaseolus vulgaris
Phvul.009G133500 10.0kb upstream 10.0kb upstream 11264 true Chr09: 20177688-20188951 Phaseolus vulgaris
Phvul.009G133500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 20178952-20188951 Phaseolus vulgaris
Phvul.009G133500 10.0kb downstream 10.0kb downstream 11264 true Chr09: 20167688-20178951 Phaseolus vulgaris
Phvul.009G133500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 20167688-20177687 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312015 5265 Fabidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.40619 0.0 18.8247    
cufflinks 1.98573 0.0 6.67541    
cufflinks 0.780153 0.0 2.87722   Low
cufflinks 3.53725 0.0 11.1497    
cufflinks 1.26752 0.0 4.48014    
cufflinks 0.589 0.0 2.22732   Low
cufflinks 22.1598 0.0 58.2289   High
cufflinks 6.29448 0.0 18.4751    
cufflinks 53.8253 0.0 139.517 High High
cufflinks 2.30646 0.0 7.62937    
cufflinks 2.36878 0.0 7.79925    

0 Strain