Gene : Phvul.009G120500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31490:SF3 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  1242
Name:  ? Phvul.009G120500 Secondary Identifier:  ? PAC:37149650
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G120500 0.5kb upstream 0.5kb upstream 7254 true Chr09: 18398176-18405429 Phaseolus vulgaris
Phvul.009G120500 0.5kb upstream 0.5kb upstream 500 false Chr09: 18398176-18398675 Phaseolus vulgaris
Phvul.009G120500 0.5kb downstream 0.5kb downstream 7254 true Chr09: 18398676-18405929 Phaseolus vulgaris
Phvul.009G120500 0.5kb downstream 0.5kb downstream 500 false Chr09: 18405430-18405929 Phaseolus vulgaris
Phvul.009G120500 1.0kb upstream 1.0kb upstream 7754 true Chr09: 18397676-18405429 Phaseolus vulgaris
Phvul.009G120500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18397676-18398675 Phaseolus vulgaris
Phvul.009G120500 1.0kb downstream 1.0kb downstream 7754 true Chr09: 18398676-18406429 Phaseolus vulgaris
Phvul.009G120500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18405430-18406429 Phaseolus vulgaris
Phvul.009G120500 2.0kb upstream 2.0kb upstream 8754 true Chr09: 18396676-18405429 Phaseolus vulgaris
Phvul.009G120500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18396676-18398675 Phaseolus vulgaris
Phvul.009G120500 2.0kb downstream 2.0kb downstream 8754 true Chr09: 18398676-18407429 Phaseolus vulgaris
Phvul.009G120500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18405430-18407429 Phaseolus vulgaris
Phvul.009G120500 5.0kb upstream 5.0kb upstream 11754 true Chr09: 18393676-18405429 Phaseolus vulgaris
Phvul.009G120500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18393676-18398675 Phaseolus vulgaris
Phvul.009G120500 5.0kb downstream 5.0kb downstream 11754 true Chr09: 18398676-18410429 Phaseolus vulgaris
Phvul.009G120500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18405430-18410429 Phaseolus vulgaris
Phvul.009G120500 10.0kb upstream 10.0kb upstream 16754 true Chr09: 18388676-18405429 Phaseolus vulgaris
Phvul.009G120500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18388676-18398675 Phaseolus vulgaris
Phvul.009G120500 10.0kb downstream 10.0kb downstream 16754 true Chr09: 18398676-18415429 Phaseolus vulgaris
Phvul.009G120500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18405430-18415429 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306431 5265 Fabidae View MSA
124067450 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.83833 0.0 5.76862    
cufflinks 5.09891 0.0 14.316    
cufflinks 3.11062 0.0 9.15044    
cufflinks 2.9166 0.0 8.71595    
cufflinks 1.34937 0.0 4.41638    
cufflinks 5.70049 0.0 15.8229    
cufflinks 1.77417 0.0 5.5896    
cufflinks 5.38907 0.0 14.985    
cufflinks 0.130652 0.0 0.52731 Low Low
cufflinks 5.81749 0.0 16.1696    
cufflinks 2.2704 0.0 7.00146    

0 Strain