Gene : Phvul.009G120100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11913:SF16 - ACTIN-DEPOLYMERIZING FACTOR 5-RELATED Genomic Order:  1238
Name:  ? Phvul.009G120100 Secondary Identifier:  ? PAC:37148856
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G120100 0.5kb upstream 0.5kb upstream 1537 true Chr09: 18367766-18369302 Phaseolus vulgaris
Phvul.009G120100 0.5kb upstream 0.5kb upstream 500 false Chr09: 18368803-18369302 Phaseolus vulgaris
Phvul.009G120100 0.5kb downstream 0.5kb downstream 1537 true Chr09: 18367266-18368802 Phaseolus vulgaris
Phvul.009G120100 0.5kb downstream 0.5kb downstream 500 false Chr09: 18367266-18367765 Phaseolus vulgaris
Phvul.009G120100 1.0kb upstream 1.0kb upstream 2037 true Chr09: 18367766-18369802 Phaseolus vulgaris
Phvul.009G120100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18368803-18369802 Phaseolus vulgaris
Phvul.009G120100 1.0kb downstream 1.0kb downstream 2037 true Chr09: 18366766-18368802 Phaseolus vulgaris
Phvul.009G120100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18366766-18367765 Phaseolus vulgaris
Phvul.009G120100 2.0kb upstream 2.0kb upstream 3037 true Chr09: 18367766-18370802 Phaseolus vulgaris
Phvul.009G120100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18368803-18370802 Phaseolus vulgaris
Phvul.009G120100 2.0kb downstream 2.0kb downstream 3037 true Chr09: 18365766-18368802 Phaseolus vulgaris
Phvul.009G120100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18365766-18367765 Phaseolus vulgaris
Phvul.009G120100 5.0kb upstream 5.0kb upstream 6037 true Chr09: 18367766-18373802 Phaseolus vulgaris
Phvul.009G120100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18368803-18373802 Phaseolus vulgaris
Phvul.009G120100 5.0kb downstream 5.0kb downstream 6037 true Chr09: 18362766-18368802 Phaseolus vulgaris
Phvul.009G120100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18362766-18367765 Phaseolus vulgaris
Phvul.009G120100 10.0kb upstream 10.0kb upstream 11037 true Chr09: 18367766-18378802 Phaseolus vulgaris
Phvul.009G120100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18368803-18378802 Phaseolus vulgaris
Phvul.009G120100 10.0kb downstream 10.0kb downstream 11037 true Chr09: 18357766-18368802 Phaseolus vulgaris
Phvul.009G120100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18357766-18367765 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254650 5265 Fabidae View MSA
123996716 5270 Rosid View MSA
123571139 5271 Pentapetalae View MSA
122795975 5272 Eudicot View MSA
122046307 5273 Angiosperm View MSA
121310587 5274 Embryophyte View MSA
123348034 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.79909 0.0 9.69501   Low
cufflinks 12.9987 0.0 37.8953    
cufflinks 10.0697 0.0 30.3493    
cufflinks 8.75579 0.0 26.5581    
cufflinks 19.8385 0.0 55.4164   High
cufflinks 6.98925 0.0 21.915    
cufflinks 4.2437 0.0 14.0028    
cufflinks 5.05956 0.0 16.4267    
cufflinks 5.39554 0.0 17.3068    
cufflinks 4.71022 0.0 15.4278    
cufflinks 18.1896 0.0 51.1869   High

0 Strain