Gene : Phvul.009G121300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D Genomic Order:  1250
Name:  ? Phvul.009G121300 Secondary Identifier:  ? PAC:37148874
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G121300 0.5kb upstream 0.5kb upstream 6766 true Chr09: 18564376-18571141 Phaseolus vulgaris
Phvul.009G121300 0.5kb upstream 0.5kb upstream 500 false Chr09: 18570642-18571141 Phaseolus vulgaris
Phvul.009G121300 0.5kb downstream 0.5kb downstream 6766 true Chr09: 18563876-18570641 Phaseolus vulgaris
Phvul.009G121300 0.5kb downstream 0.5kb downstream 500 false Chr09: 18563876-18564375 Phaseolus vulgaris
Phvul.009G121300 1.0kb upstream 1.0kb upstream 7266 true Chr09: 18564376-18571641 Phaseolus vulgaris
Phvul.009G121300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18570642-18571641 Phaseolus vulgaris
Phvul.009G121300 1.0kb downstream 1.0kb downstream 7266 true Chr09: 18563376-18570641 Phaseolus vulgaris
Phvul.009G121300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18563376-18564375 Phaseolus vulgaris
Phvul.009G121300 2.0kb upstream 2.0kb upstream 8266 true Chr09: 18564376-18572641 Phaseolus vulgaris
Phvul.009G121300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18570642-18572641 Phaseolus vulgaris
Phvul.009G121300 2.0kb downstream 2.0kb downstream 8266 true Chr09: 18562376-18570641 Phaseolus vulgaris
Phvul.009G121300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18562376-18564375 Phaseolus vulgaris
Phvul.009G121300 5.0kb upstream 5.0kb upstream 11266 true Chr09: 18564376-18575641 Phaseolus vulgaris
Phvul.009G121300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18570642-18575641 Phaseolus vulgaris
Phvul.009G121300 5.0kb downstream 5.0kb downstream 11266 true Chr09: 18559376-18570641 Phaseolus vulgaris
Phvul.009G121300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18559376-18564375 Phaseolus vulgaris
Phvul.009G121300 10.0kb upstream 10.0kb upstream 16266 true Chr09: 18564376-18580641 Phaseolus vulgaris
Phvul.009G121300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18570642-18580641 Phaseolus vulgaris
Phvul.009G121300 10.0kb downstream 10.0kb downstream 16266 true Chr09: 18554376-18570641 Phaseolus vulgaris
Phvul.009G121300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18554376-18564375 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122302248 5265 Fabidae View MSA
124062971 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.176 0.0 21.2086   Low
cufflinks 12.7348 0.0 40.4603    
cufflinks 14.5788 0.0 46.3357    
cufflinks 11.4412 0.0 36.6037    
cufflinks 14.8276 0.0 47.2027    
cufflinks 11.1791 0.0 35.6587    
cufflinks 15.8634 0.0 50.6704    
cufflinks 19.2358 0.0 62.1513   High
cufflinks 15.1225 0.0 48.1832    
cufflinks 10.144 0.0 32.6026    
cufflinks 13.116 0.0 41.7891    

0 Strain