Gene : Phvul.009G122700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31636:SF25 - SCARECROW-LIKE PROTEIN 26 Genomic Order:  1264
Name:  ? Phvul.009G122700 Secondary Identifier:  ? PAC:37149172
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G122700 0.5kb upstream 0.5kb upstream 2006 true Chr09: 18715588-18717593 Phaseolus vulgaris
Phvul.009G122700 0.5kb upstream 0.5kb upstream 500 false Chr09: 18717094-18717593 Phaseolus vulgaris
Phvul.009G122700 0.5kb downstream 0.5kb downstream 2006 true Chr09: 18715088-18717093 Phaseolus vulgaris
Phvul.009G122700 0.5kb downstream 0.5kb downstream 500 false Chr09: 18715088-18715587 Phaseolus vulgaris
Phvul.009G122700 1.0kb upstream 1.0kb upstream 2506 true Chr09: 18715588-18718093 Phaseolus vulgaris
Phvul.009G122700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18717094-18718093 Phaseolus vulgaris
Phvul.009G122700 1.0kb downstream 1.0kb downstream 2506 true Chr09: 18714588-18717093 Phaseolus vulgaris
Phvul.009G122700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18714588-18715587 Phaseolus vulgaris
Phvul.009G122700 2.0kb upstream 2.0kb upstream 3506 true Chr09: 18715588-18719093 Phaseolus vulgaris
Phvul.009G122700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18717094-18719093 Phaseolus vulgaris
Phvul.009G122700 2.0kb downstream 2.0kb downstream 3506 true Chr09: 18713588-18717093 Phaseolus vulgaris
Phvul.009G122700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18713588-18715587 Phaseolus vulgaris
Phvul.009G122700 5.0kb upstream 5.0kb upstream 6506 true Chr09: 18715588-18722093 Phaseolus vulgaris
Phvul.009G122700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18717094-18722093 Phaseolus vulgaris
Phvul.009G122700 5.0kb downstream 5.0kb downstream 6506 true Chr09: 18710588-18717093 Phaseolus vulgaris
Phvul.009G122700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18710588-18715587 Phaseolus vulgaris
Phvul.009G122700 10.0kb upstream 10.0kb upstream 11506 true Chr09: 18715588-18727093 Phaseolus vulgaris
Phvul.009G122700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18717094-18727093 Phaseolus vulgaris
Phvul.009G122700 10.0kb downstream 10.0kb downstream 11506 true Chr09: 18705588-18717093 Phaseolus vulgaris
Phvul.009G122700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18705588-18715587 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305315 5265 Fabidae View MSA
124066104 5270 Rosid View MSA
123741330 5271 Pentapetalae View MSA
122785836 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117045 0.0 0.479372 Low Low
cufflinks 0.831156 0.0 2.88824    
cufflinks 1.22358 0.0 4.10872    
cufflinks 0.168375 0.0 0.665522 Low Low
cufflinks 1.87788 0.0 5.87255    
cufflinks 0.958742 0.0 3.28428    
cufflinks 4.01762 0.0 11.4992   High
cufflinks 1.67516 0.0 5.37367    
cufflinks 2.63304 0.0 7.91396    
cufflinks 1.99428 0.0 6.27157    
cufflinks 1.34273 0.0 4.36668    

0 Strain