Gene : Phvul.009G125200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Genomic Order:  1290
Name:  ? Phvul.009G125200 Secondary Identifier:  ? PAC:37151715
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G125200 0.5kb upstream 0.5kb upstream 5415 true Chr09: 19103883-19109297 Phaseolus vulgaris
Phvul.009G125200 0.5kb upstream 0.5kb upstream 500 false Chr09: 19103883-19104382 Phaseolus vulgaris
Phvul.009G125200 0.5kb downstream 0.5kb downstream 5415 true Chr09: 19104383-19109797 Phaseolus vulgaris
Phvul.009G125200 0.5kb downstream 0.5kb downstream 500 false Chr09: 19109298-19109797 Phaseolus vulgaris
Phvul.009G125200 1.0kb upstream 1.0kb upstream 5915 true Chr09: 19103383-19109297 Phaseolus vulgaris
Phvul.009G125200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19103383-19104382 Phaseolus vulgaris
Phvul.009G125200 1.0kb downstream 1.0kb downstream 5915 true Chr09: 19104383-19110297 Phaseolus vulgaris
Phvul.009G125200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19109298-19110297 Phaseolus vulgaris
Phvul.009G125200 2.0kb upstream 2.0kb upstream 6915 true Chr09: 19102383-19109297 Phaseolus vulgaris
Phvul.009G125200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19102383-19104382 Phaseolus vulgaris
Phvul.009G125200 2.0kb downstream 2.0kb downstream 6915 true Chr09: 19104383-19111297 Phaseolus vulgaris
Phvul.009G125200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19109298-19111297 Phaseolus vulgaris
Phvul.009G125200 5.0kb upstream 5.0kb upstream 9915 true Chr09: 19099383-19109297 Phaseolus vulgaris
Phvul.009G125200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19099383-19104382 Phaseolus vulgaris
Phvul.009G125200 5.0kb downstream 5.0kb downstream 9915 true Chr09: 19104383-19114297 Phaseolus vulgaris
Phvul.009G125200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19109298-19114297 Phaseolus vulgaris
Phvul.009G125200 10.0kb upstream 10.0kb upstream 14915 true Chr09: 19094383-19109297 Phaseolus vulgaris
Phvul.009G125200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19094383-19104382 Phaseolus vulgaris
Phvul.009G125200 10.0kb downstream 10.0kb downstream 14915 true Chr09: 19104383-19119297 Phaseolus vulgaris
Phvul.009G125200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19109298-19119297 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254094 5265 Fabidae View MSA
123996413 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0680269 0.0 0.288825 Low Low
cufflinks 1.64171 0.0 5.43834    
cufflinks 0.658258 0.0 2.77354    
cufflinks 0.214107 0.0 1.09662 Low  
cufflinks 0.224674 0.0 1.10474 Low  
cufflinks 3.77103 0.0 12.7652   High
cufflinks 1.03222 0.0 4.91836    
cufflinks 1.47922 0.0 6.42836    
cufflinks 0.928213 0.0 3.52009    
cufflinks 0.035552 0.0 0.166487 Low Low
cufflinks 0.252605 0.0 1.16856 Low  

0 Strain