Gene : Phvul.009G125400 P. vulgaris v2.1
Defline:  (1 of 3) K02984 - small subunit ribosomal protein S3Ae (RP-S3Ae, RPS3A) Genomic Order:  1292
Name:  ? Phvul.009G125400 Secondary Identifier:  ? PAC:37148698
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G125400 0.5kb upstream 0.5kb upstream 2207 true Chr09: 19122312-19124518 Phaseolus vulgaris
Phvul.009G125400 0.5kb upstream 0.5kb upstream 500 false Chr09: 19124019-19124518 Phaseolus vulgaris
Phvul.009G125400 0.5kb downstream 0.5kb downstream 2207 true Chr09: 19121812-19124018 Phaseolus vulgaris
Phvul.009G125400 0.5kb downstream 0.5kb downstream 500 false Chr09: 19121812-19122311 Phaseolus vulgaris
Phvul.009G125400 1.0kb upstream 1.0kb upstream 2707 true Chr09: 19122312-19125018 Phaseolus vulgaris
Phvul.009G125400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19124019-19125018 Phaseolus vulgaris
Phvul.009G125400 1.0kb downstream 1.0kb downstream 2707 true Chr09: 19121312-19124018 Phaseolus vulgaris
Phvul.009G125400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19121312-19122311 Phaseolus vulgaris
Phvul.009G125400 2.0kb upstream 2.0kb upstream 3707 true Chr09: 19122312-19126018 Phaseolus vulgaris
Phvul.009G125400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19124019-19126018 Phaseolus vulgaris
Phvul.009G125400 2.0kb downstream 2.0kb downstream 3707 true Chr09: 19120312-19124018 Phaseolus vulgaris
Phvul.009G125400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19120312-19122311 Phaseolus vulgaris
Phvul.009G125400 5.0kb upstream 5.0kb upstream 6707 true Chr09: 19122312-19129018 Phaseolus vulgaris
Phvul.009G125400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19124019-19129018 Phaseolus vulgaris
Phvul.009G125400 5.0kb downstream 5.0kb downstream 6707 true Chr09: 19117312-19124018 Phaseolus vulgaris
Phvul.009G125400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19117312-19122311 Phaseolus vulgaris
Phvul.009G125400 10.0kb upstream 10.0kb upstream 11707 true Chr09: 19122312-19134018 Phaseolus vulgaris
Phvul.009G125400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19124019-19134018 Phaseolus vulgaris
Phvul.009G125400 10.0kb downstream 10.0kb downstream 11707 true Chr09: 19112312-19124018 Phaseolus vulgaris
Phvul.009G125400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19112312-19122311 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255405 5265 Fabidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0603232 0.0 0.277661 Low  
cufflinks 0.382546 0.0 1.49182 Low High
cufflinks 0.152196 0.0 0.639023 Low  
cufflinks 0.286097 0.0 1.14702 Low  
cufflinks 0.0523438 0.0 0.245783 Low  
cufflinks 0.185823 0.0 0.76641 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0156474 0.0 0.0836963 Low Low
cufflinks 0.119891 0.0 0.515975 Low  

0 Strain