Gene : Phvul.009G124900 P. vulgaris v2.1
Genomic Order:  1287 Name:  ? Phvul.009G124900
Secondary Identifier:  ? PAC:37151480
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G124900 0.5kb upstream 0.5kb upstream 3219 true Chr09: 19087431-19090649 Phaseolus vulgaris
Phvul.009G124900 0.5kb upstream 0.5kb upstream 500 false Chr09: 19087431-19087930 Phaseolus vulgaris
Phvul.009G124900 0.5kb downstream 0.5kb downstream 3219 true Chr09: 19087931-19091149 Phaseolus vulgaris
Phvul.009G124900 0.5kb downstream 0.5kb downstream 500 false Chr09: 19090650-19091149 Phaseolus vulgaris
Phvul.009G124900 1.0kb upstream 1.0kb upstream 3719 true Chr09: 19086931-19090649 Phaseolus vulgaris
Phvul.009G124900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19086931-19087930 Phaseolus vulgaris
Phvul.009G124900 1.0kb downstream 1.0kb downstream 3719 true Chr09: 19087931-19091649 Phaseolus vulgaris
Phvul.009G124900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19090650-19091649 Phaseolus vulgaris
Phvul.009G124900 2.0kb upstream 2.0kb upstream 4719 true Chr09: 19085931-19090649 Phaseolus vulgaris
Phvul.009G124900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19085931-19087930 Phaseolus vulgaris
Phvul.009G124900 2.0kb downstream 2.0kb downstream 4719 true Chr09: 19087931-19092649 Phaseolus vulgaris
Phvul.009G124900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19090650-19092649 Phaseolus vulgaris
Phvul.009G124900 5.0kb upstream 5.0kb upstream 7719 true Chr09: 19082931-19090649 Phaseolus vulgaris
Phvul.009G124900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19082931-19087930 Phaseolus vulgaris
Phvul.009G124900 5.0kb downstream 5.0kb downstream 7719 true Chr09: 19087931-19095649 Phaseolus vulgaris
Phvul.009G124900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19090650-19095649 Phaseolus vulgaris
Phvul.009G124900 10.0kb upstream 10.0kb upstream 12719 true Chr09: 19077931-19090649 Phaseolus vulgaris
Phvul.009G124900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19077931-19087930 Phaseolus vulgaris
Phvul.009G124900 10.0kb downstream 10.0kb downstream 12719 true Chr09: 19087931-19100649 Phaseolus vulgaris
Phvul.009G124900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19090650-19100649 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311811 5265 Fabidae View MSA
124067867 5270 Rosid View MSA
123750206 5271 Pentapetalae View MSA
122796157 5272 Eudicot View MSA
122043304 5273 Angiosperm View MSA
121310104 5274 Embryophyte View MSA
123347686 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9919 0.0 31.8104    
cufflinks 4.80385 0.0 13.8255    
cufflinks 6.69084 0.0 18.6369    
cufflinks 27.9754 0.0 72.3139   High
cufflinks 8.02084 0.0 22.1178    
cufflinks 7.37297 0.0 20.3681    
cufflinks 3.74159 0.0 11.0172    
cufflinks 3.76499 0.0 11.046    
cufflinks 3.02938 0.0 9.15017   Low
cufflinks 4.60597 0.0 13.3564    
cufflinks 9.42949 0.0 25.565    

0 Strain