Gene : Phvul.006G217400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31673:SF5 - COBRA-LIKE PROTEIN 6 Genomic Order:  2192
Name:  ? Phvul.006G217400 Secondary Identifier:  ? PAC:37173385
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G217400 0.5kb upstream 0.5kb upstream 3135 true Chr06: 30944837-30947971 Phaseolus vulgaris
Phvul.006G217400 0.5kb upstream 0.5kb upstream 500 false Chr06: 30944837-30945336 Phaseolus vulgaris
Phvul.006G217400 0.5kb downstream 0.5kb downstream 3135 true Chr06: 30945337-30948471 Phaseolus vulgaris
Phvul.006G217400 0.5kb downstream 0.5kb downstream 500 false Chr06: 30947972-30948471 Phaseolus vulgaris
Phvul.006G217400 1.0kb upstream 1.0kb upstream 3635 true Chr06: 30944337-30947971 Phaseolus vulgaris
Phvul.006G217400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30944337-30945336 Phaseolus vulgaris
Phvul.006G217400 1.0kb downstream 1.0kb downstream 3635 true Chr06: 30945337-30948971 Phaseolus vulgaris
Phvul.006G217400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30947972-30948971 Phaseolus vulgaris
Phvul.006G217400 2.0kb upstream 2.0kb upstream 4635 true Chr06: 30943337-30947971 Phaseolus vulgaris
Phvul.006G217400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30943337-30945336 Phaseolus vulgaris
Phvul.006G217400 2.0kb downstream 2.0kb downstream 4635 true Chr06: 30945337-30949971 Phaseolus vulgaris
Phvul.006G217400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30947972-30949971 Phaseolus vulgaris
Phvul.006G217400 5.0kb upstream 5.0kb upstream 7635 true Chr06: 30940337-30947971 Phaseolus vulgaris
Phvul.006G217400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30940337-30945336 Phaseolus vulgaris
Phvul.006G217400 5.0kb downstream 5.0kb downstream 7635 true Chr06: 30945337-30952971 Phaseolus vulgaris
Phvul.006G217400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30947972-30952971 Phaseolus vulgaris
Phvul.006G217400 10.0kb upstream 10.0kb upstream 12635 true Chr06: 30935337-30947971 Phaseolus vulgaris
Phvul.006G217400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30935337-30945336 Phaseolus vulgaris
Phvul.006G217400 10.0kb downstream 10.0kb downstream 12635 true Chr06: 30945337-30957971 Phaseolus vulgaris
Phvul.006G217400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30947972-30957971 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026737 5273 Angiosperm View MSA
122301985 5265 Fabidae View MSA
124066696 5270 Rosid View MSA
123740872 5271 Pentapetalae View MSA
122795102 5272 Eudicot View MSA
121296516 5274 Embryophyte View MSA
123334664 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0269746 0.0 0.133686 Low  
cufflinks 0.0250993 0.0 0.125361 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0217454 0.0 0.110102 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain