Gene : Phvul.006G217900 P. vulgaris v2.1
Defline:  (1 of 1) K10134 - etoposide-induced 2.4 mRNA (EI24) Genomic Order:  2197
Name:  ? Phvul.006G217900 Secondary Identifier:  ? PAC:37171867
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G217900 0.5kb upstream 0.5kb upstream 7070 true Chr06: 30976838-30983907 Phaseolus vulgaris
Phvul.006G217900 0.5kb upstream 0.5kb upstream 500 false Chr06: 30983408-30983907 Phaseolus vulgaris
Phvul.006G217900 0.5kb downstream 0.5kb downstream 7070 true Chr06: 30976338-30983407 Phaseolus vulgaris
Phvul.006G217900 0.5kb downstream 0.5kb downstream 500 false Chr06: 30976338-30976837 Phaseolus vulgaris
Phvul.006G217900 1.0kb upstream 1.0kb upstream 7570 true Chr06: 30976838-30984407 Phaseolus vulgaris
Phvul.006G217900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30983408-30984407 Phaseolus vulgaris
Phvul.006G217900 1.0kb downstream 1.0kb downstream 7570 true Chr06: 30975838-30983407 Phaseolus vulgaris
Phvul.006G217900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30975838-30976837 Phaseolus vulgaris
Phvul.006G217900 2.0kb upstream 2.0kb upstream 8570 true Chr06: 30976838-30985407 Phaseolus vulgaris
Phvul.006G217900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30983408-30985407 Phaseolus vulgaris
Phvul.006G217900 2.0kb downstream 2.0kb downstream 8570 true Chr06: 30974838-30983407 Phaseolus vulgaris
Phvul.006G217900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30974838-30976837 Phaseolus vulgaris
Phvul.006G217900 5.0kb upstream 5.0kb upstream 11570 true Chr06: 30976838-30988407 Phaseolus vulgaris
Phvul.006G217900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30983408-30988407 Phaseolus vulgaris
Phvul.006G217900 5.0kb downstream 5.0kb downstream 11570 true Chr06: 30971838-30983407 Phaseolus vulgaris
Phvul.006G217900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30971838-30976837 Phaseolus vulgaris
Phvul.006G217900 10.0kb upstream 10.0kb upstream 16570 true Chr06: 30976838-30993407 Phaseolus vulgaris
Phvul.006G217900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30983408-30993407 Phaseolus vulgaris
Phvul.006G217900 10.0kb downstream 10.0kb downstream 16570 true Chr06: 30966838-30983407 Phaseolus vulgaris
Phvul.006G217900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30966838-30976837 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300826 5265 Fabidae View MSA
124060748 5270 Rosid View MSA
123747133 5271 Pentapetalae View MSA
122786672 5272 Eudicot View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3791 0.0 38.7247   High
cufflinks 4.90092 0.0 18.8212    
cufflinks 5.32556 0.0 19.8026    
cufflinks 5.05672 0.0 19.6861    
cufflinks 5.05707 0.0 19.4049    
cufflinks 4.54589 0.0 17.7035   Low
cufflinks 8.05322 0.0 29.8342    
cufflinks 6.35714 0.0 24.8694    
cufflinks 9.04002 0.0 30.4133   High
cufflinks 8.56146 0.0 51.7026    
cufflinks 5.01145 0.0 19.3425    

0 Strain