Gene : Phvul.006G216100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12832 - TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 Genomic Order:  2179
Name:  ? Phvul.006G216100 Secondary Identifier:  ? PAC:37172335
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G216100 0.5kb upstream 0.5kb upstream 8673 true Chr06: 30875477-30884149 Phaseolus vulgaris
Phvul.006G216100 0.5kb upstream 0.5kb upstream 500 false Chr06: 30875477-30875976 Phaseolus vulgaris
Phvul.006G216100 0.5kb downstream 0.5kb downstream 8673 true Chr06: 30875977-30884649 Phaseolus vulgaris
Phvul.006G216100 0.5kb downstream 0.5kb downstream 500 false Chr06: 30884150-30884649 Phaseolus vulgaris
Phvul.006G216100 1.0kb upstream 1.0kb upstream 9173 true Chr06: 30874977-30884149 Phaseolus vulgaris
Phvul.006G216100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30874977-30875976 Phaseolus vulgaris
Phvul.006G216100 1.0kb downstream 1.0kb downstream 9173 true Chr06: 30875977-30885149 Phaseolus vulgaris
Phvul.006G216100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30884150-30885149 Phaseolus vulgaris
Phvul.006G216100 2.0kb upstream 2.0kb upstream 10173 true Chr06: 30873977-30884149 Phaseolus vulgaris
Phvul.006G216100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30873977-30875976 Phaseolus vulgaris
Phvul.006G216100 2.0kb downstream 2.0kb downstream 10173 true Chr06: 30875977-30886149 Phaseolus vulgaris
Phvul.006G216100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30884150-30886149 Phaseolus vulgaris
Phvul.006G216100 5.0kb upstream 5.0kb upstream 13173 true Chr06: 30870977-30884149 Phaseolus vulgaris
Phvul.006G216100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30870977-30875976 Phaseolus vulgaris
Phvul.006G216100 5.0kb downstream 5.0kb downstream 13173 true Chr06: 30875977-30889149 Phaseolus vulgaris
Phvul.006G216100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30884150-30889149 Phaseolus vulgaris
Phvul.006G216100 10.0kb upstream 10.0kb upstream 18173 true Chr06: 30865977-30884149 Phaseolus vulgaris
Phvul.006G216100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30865977-30875976 Phaseolus vulgaris
Phvul.006G216100 10.0kb downstream 10.0kb downstream 18173 true Chr06: 30875977-30894149 Phaseolus vulgaris
Phvul.006G216100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30884150-30894149 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308652 5265 Fabidae View MSA
124065811 5270 Rosid View MSA
123746081 5271 Pentapetalae View MSA
122792060 5272 Eudicot View MSA
122043242 5273 Angiosperm View MSA
121345323 5274 Embryophyte View MSA
123426758 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.8201 0.0 127.365    
cufflinks 24.917 0.0 91.3536    
cufflinks 15.2429 0.0 51.6897   Low
cufflinks 12.1984 0.0 39.9892   Low
cufflinks 28.878 0.0 109.411    
cufflinks 29.1159 0.0 112.384    
cufflinks 45.1085 0.0 168.984 High High
cufflinks 22.896 0.0 81.977    
cufflinks 51.9456 0.0 236.548 High High
cufflinks 53.35 0.0 241.871 High High
cufflinks 21.8425 0.0 78.3312    

0 Strain