Gene : Phvul.009G110200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12649:SF12 - PEPTIDYL-TRNA HYDROLASE II (PTH2) FAMILY PROTEIN Genomic Order:  1137
Name:  ? Phvul.009G110200 Secondary Identifier:  ? PAC:37150039
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G110200 0.5kb upstream 0.5kb upstream 3488 true Chr09: 17051857-17055344 Phaseolus vulgaris
Phvul.009G110200 0.5kb upstream 0.5kb upstream 500 false Chr09: 17051857-17052356 Phaseolus vulgaris
Phvul.009G110200 0.5kb downstream 0.5kb downstream 3488 true Chr09: 17052357-17055844 Phaseolus vulgaris
Phvul.009G110200 0.5kb downstream 0.5kb downstream 500 false Chr09: 17055345-17055844 Phaseolus vulgaris
Phvul.009G110200 1.0kb upstream 1.0kb upstream 3988 true Chr09: 17051357-17055344 Phaseolus vulgaris
Phvul.009G110200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17051357-17052356 Phaseolus vulgaris
Phvul.009G110200 1.0kb downstream 1.0kb downstream 3988 true Chr09: 17052357-17056344 Phaseolus vulgaris
Phvul.009G110200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17055345-17056344 Phaseolus vulgaris
Phvul.009G110200 2.0kb upstream 2.0kb upstream 4988 true Chr09: 17050357-17055344 Phaseolus vulgaris
Phvul.009G110200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17050357-17052356 Phaseolus vulgaris
Phvul.009G110200 2.0kb downstream 2.0kb downstream 4988 true Chr09: 17052357-17057344 Phaseolus vulgaris
Phvul.009G110200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17055345-17057344 Phaseolus vulgaris
Phvul.009G110200 5.0kb upstream 5.0kb upstream 7988 true Chr09: 17047357-17055344 Phaseolus vulgaris
Phvul.009G110200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17047357-17052356 Phaseolus vulgaris
Phvul.009G110200 5.0kb downstream 5.0kb downstream 7988 true Chr09: 17052357-17060344 Phaseolus vulgaris
Phvul.009G110200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17055345-17060344 Phaseolus vulgaris
Phvul.009G110200 10.0kb upstream 10.0kb upstream 12988 true Chr09: 17042357-17055344 Phaseolus vulgaris
Phvul.009G110200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17042357-17052356 Phaseolus vulgaris
Phvul.009G110200 10.0kb downstream 10.0kb downstream 12988 true Chr09: 17052357-17065344 Phaseolus vulgaris
Phvul.009G110200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17055345-17065344 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041458 5273 Angiosperm View MSA
122300216 5265 Fabidae View MSA
124065431 5270 Rosid View MSA
123745404 5271 Pentapetalae View MSA
122792467 5272 Eudicot View MSA
121347943 5274 Embryophyte View MSA
123426949 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5611 0.0 42.9299   High
cufflinks 10.631 0.0 30.375    
cufflinks 11.6265 0.0 32.8104    
cufflinks 13.602 0.0 38.0871    
cufflinks 6.9937 0.0 21.0812    
cufflinks 9.09794 0.0 26.3816    
cufflinks 6.39701 0.0 19.306   Low
cufflinks 9.61095 0.0 27.6071    
cufflinks 5.14503 0.0 15.9198   Low
cufflinks 15.6969 0.0 43.3814   High
cufflinks 8.60433 0.0 25.27    

0 Strain