Gene : Phvul.009G109400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF87 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  1129
Name:  ? Phvul.009G109400 Secondary Identifier:  ? PAC:37150154
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5980 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G109400 0.5kb upstream 0.5kb upstream 4211 true Chr09: 16903305-16907515 Phaseolus vulgaris
Phvul.009G109400 0.5kb upstream 0.5kb upstream 500 false Chr09: 16903305-16903804 Phaseolus vulgaris
Phvul.009G109400 0.5kb downstream 0.5kb downstream 4211 true Chr09: 16903805-16908015 Phaseolus vulgaris
Phvul.009G109400 0.5kb downstream 0.5kb downstream 500 false Chr09: 16907516-16908015 Phaseolus vulgaris
Phvul.009G109400 1.0kb upstream 1.0kb upstream 4711 true Chr09: 16902805-16907515 Phaseolus vulgaris
Phvul.009G109400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16902805-16903804 Phaseolus vulgaris
Phvul.009G109400 1.0kb downstream 1.0kb downstream 4711 true Chr09: 16903805-16908515 Phaseolus vulgaris
Phvul.009G109400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16907516-16908515 Phaseolus vulgaris
Phvul.009G109400 2.0kb upstream 2.0kb upstream 5711 true Chr09: 16901805-16907515 Phaseolus vulgaris
Phvul.009G109400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16901805-16903804 Phaseolus vulgaris
Phvul.009G109400 2.0kb downstream 2.0kb downstream 5711 true Chr09: 16903805-16909515 Phaseolus vulgaris
Phvul.009G109400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16907516-16909515 Phaseolus vulgaris
Phvul.009G109400 5.0kb upstream 5.0kb upstream 8711 true Chr09: 16898805-16907515 Phaseolus vulgaris
Phvul.009G109400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16898805-16903804 Phaseolus vulgaris
Phvul.009G109400 5.0kb downstream 5.0kb downstream 8711 true Chr09: 16903805-16912515 Phaseolus vulgaris
Phvul.009G109400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16907516-16912515 Phaseolus vulgaris
Phvul.009G109400 10.0kb upstream 10.0kb upstream 13711 true Chr09: 16893805-16907515 Phaseolus vulgaris
Phvul.009G109400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16893805-16903804 Phaseolus vulgaris
Phvul.009G109400 10.0kb downstream 10.0kb downstream 13711 true Chr09: 16903805-16917515 Phaseolus vulgaris
Phvul.009G109400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16907516-16917515 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122296823 5265 Fabidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74879 0.0 5.51385    
cufflinks 3.32073 0.0 9.76893   High
cufflinks 2.30553 0.0 7.03655    
cufflinks 2.53099 0.0 7.71884    
cufflinks 1.81413 0.0 5.76429    
cufflinks 2.87533 0.0 8.58808    
cufflinks 1.3268 0.0 4.33631    
cufflinks 0.76917 0.0 2.65683   Low
cufflinks 1.26183 0.0 4.15597    
cufflinks 3.28187 0.0 9.67869   High
cufflinks 1.94324 0.0 6.12139    

0 Strain