Gene : Phvul.006G219100 P. vulgaris v2.1
Genomic Order:  2209 Name:  ? Phvul.006G219100
Secondary Identifier:  ? PAC:37171636
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G219100 0.5kb upstream 0.5kb upstream 2449 true Chr06: 31058187-31060635 Phaseolus vulgaris
Phvul.006G219100 0.5kb upstream 0.5kb upstream 500 false Chr06: 31058187-31058686 Phaseolus vulgaris
Phvul.006G219100 0.5kb downstream 0.5kb downstream 2449 true Chr06: 31058687-31061135 Phaseolus vulgaris
Phvul.006G219100 0.5kb downstream 0.5kb downstream 500 false Chr06: 31060636-31061135 Phaseolus vulgaris
Phvul.006G219100 1.0kb upstream 1.0kb upstream 2949 true Chr06: 31057687-31060635 Phaseolus vulgaris
Phvul.006G219100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31057687-31058686 Phaseolus vulgaris
Phvul.006G219100 1.0kb downstream 1.0kb downstream 2949 true Chr06: 31058687-31061635 Phaseolus vulgaris
Phvul.006G219100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31060636-31061635 Phaseolus vulgaris
Phvul.006G219100 2.0kb upstream 2.0kb upstream 3949 true Chr06: 31056687-31060635 Phaseolus vulgaris
Phvul.006G219100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31056687-31058686 Phaseolus vulgaris
Phvul.006G219100 2.0kb downstream 2.0kb downstream 3949 true Chr06: 31058687-31062635 Phaseolus vulgaris
Phvul.006G219100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31060636-31062635 Phaseolus vulgaris
Phvul.006G219100 5.0kb upstream 5.0kb upstream 6949 true Chr06: 31053687-31060635 Phaseolus vulgaris
Phvul.006G219100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31053687-31058686 Phaseolus vulgaris
Phvul.006G219100 5.0kb downstream 5.0kb downstream 6949 true Chr06: 31058687-31065635 Phaseolus vulgaris
Phvul.006G219100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31060636-31065635 Phaseolus vulgaris
Phvul.006G219100 10.0kb upstream 10.0kb upstream 11949 true Chr06: 31048687-31060635 Phaseolus vulgaris
Phvul.006G219100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31048687-31058686 Phaseolus vulgaris
Phvul.006G219100 10.0kb downstream 10.0kb downstream 11949 true Chr06: 31058687-31070635 Phaseolus vulgaris
Phvul.006G219100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31060636-31070635 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304872 5265 Fabidae View MSA
124063488 5270 Rosid View MSA
123741215 5271 Pentapetalae View MSA
122770018 5272 Eudicot View MSA
122050944 5273 Angiosperm View MSA
121312214 5274 Embryophyte View MSA
123349408 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.597597 0.0 4.27295   Low
cufflinks 1.59282 0.0 6.9068    
cufflinks 1.35347 0.0 7.8852    
cufflinks 1.50338 0.0 6.72477    
cufflinks 13.7115 0.0 45.6713   High
cufflinks 2.24099 0.0 12.0024    
cufflinks 7.31263 0.0 27.55    
cufflinks 3.37333 0.0 15.3732    
cufflinks 5.01983 0.0 20.7728    
cufflinks 0.29879 0.0 1.22941 Low Low
cufflinks 14.8258 0.0 48.1385   High

0 Strain