Gene : Phvul.006G219200 P. vulgaris v2.1
Defline:  (1 of 9) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  2210
Name:  ? Phvul.006G219200 Secondary Identifier:  ? PAC:37172629
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G219200 0.5kb upstream 0.5kb upstream 9883 true Chr06: 31062671-31072553 Phaseolus vulgaris
Phvul.006G219200 0.5kb upstream 0.5kb upstream 500 false Chr06: 31072054-31072553 Phaseolus vulgaris
Phvul.006G219200 0.5kb downstream 0.5kb downstream 9883 true Chr06: 31062171-31072053 Phaseolus vulgaris
Phvul.006G219200 0.5kb downstream 0.5kb downstream 500 false Chr06: 31062171-31062670 Phaseolus vulgaris
Phvul.006G219200 1.0kb upstream 1.0kb upstream 10383 true Chr06: 31062671-31073053 Phaseolus vulgaris
Phvul.006G219200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31072054-31073053 Phaseolus vulgaris
Phvul.006G219200 1.0kb downstream 1.0kb downstream 10383 true Chr06: 31061671-31072053 Phaseolus vulgaris
Phvul.006G219200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31061671-31062670 Phaseolus vulgaris
Phvul.006G219200 2.0kb upstream 2.0kb upstream 11383 true Chr06: 31062671-31074053 Phaseolus vulgaris
Phvul.006G219200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31072054-31074053 Phaseolus vulgaris
Phvul.006G219200 2.0kb downstream 2.0kb downstream 11383 true Chr06: 31060671-31072053 Phaseolus vulgaris
Phvul.006G219200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31060671-31062670 Phaseolus vulgaris
Phvul.006G219200 5.0kb upstream 5.0kb upstream 14383 true Chr06: 31062671-31077053 Phaseolus vulgaris
Phvul.006G219200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31072054-31077053 Phaseolus vulgaris
Phvul.006G219200 5.0kb downstream 5.0kb downstream 14383 true Chr06: 31057671-31072053 Phaseolus vulgaris
Phvul.006G219200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31057671-31062670 Phaseolus vulgaris
Phvul.006G219200 10.0kb upstream 10.0kb upstream 19383 true Chr06: 31062671-31082053 Phaseolus vulgaris
Phvul.006G219200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31072054-31082053 Phaseolus vulgaris
Phvul.006G219200 10.0kb downstream 10.0kb downstream 19383 true Chr06: 31052671-31072053 Phaseolus vulgaris
Phvul.006G219200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31052671-31062670 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307882 5265 Fabidae View MSA
124064187 5270 Rosid View MSA
123748363 5271 Pentapetalae View MSA
122787729 5272 Eudicot View MSA
122047802 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18681 0.0 14.7943   Low
cufflinks 4.54205 0.0 16.8482   Low
cufflinks 7.64059 0.0 33.6309    
cufflinks 4.90188 0.0 22.1659    
cufflinks 7.36673 0.0 31.8915    
cufflinks 7.13984 0.0 30.3016    
cufflinks 6.97655 0.0 30.6568    
cufflinks 9.09039 0.0 35.3089   High
cufflinks 5.88009 0.0 27.0778    
cufflinks 6.46117 0.0 29.4718    
cufflinks 8.47707 0.0 36.8437    

0 Strain