Gene : Phvul.009G112450 P. vulgaris v2.1
Defline:  (1 of 9) K00850 - 6-phosphofructokinase 1 (pfkA, PFK) Genomic Order:  1159
Name:  ? Phvul.009G112450 Secondary Identifier:  ? PAC:37150885
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G112450 0.5kb upstream 0.5kb upstream 14567 true Chr09: 17344655-17359221 Phaseolus vulgaris
Phvul.009G112450 0.5kb upstream 0.5kb upstream 500 false Chr09: 17344655-17345154 Phaseolus vulgaris
Phvul.009G112450 0.5kb downstream 0.5kb downstream 14567 true Chr09: 17345155-17359721 Phaseolus vulgaris
Phvul.009G112450 0.5kb downstream 0.5kb downstream 500 false Chr09: 17359222-17359721 Phaseolus vulgaris
Phvul.009G112450 1.0kb upstream 1.0kb upstream 15067 true Chr09: 17344155-17359221 Phaseolus vulgaris
Phvul.009G112450 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17344155-17345154 Phaseolus vulgaris
Phvul.009G112450 1.0kb downstream 1.0kb downstream 15067 true Chr09: 17345155-17360221 Phaseolus vulgaris
Phvul.009G112450 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17359222-17360221 Phaseolus vulgaris
Phvul.009G112450 2.0kb upstream 2.0kb upstream 16067 true Chr09: 17343155-17359221 Phaseolus vulgaris
Phvul.009G112450 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17343155-17345154 Phaseolus vulgaris
Phvul.009G112450 2.0kb downstream 2.0kb downstream 16067 true Chr09: 17345155-17361221 Phaseolus vulgaris
Phvul.009G112450 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17359222-17361221 Phaseolus vulgaris
Phvul.009G112450 5.0kb upstream 5.0kb upstream 19067 true Chr09: 17340155-17359221 Phaseolus vulgaris
Phvul.009G112450 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17340155-17345154 Phaseolus vulgaris
Phvul.009G112450 5.0kb downstream 5.0kb downstream 19067 true Chr09: 17345155-17364221 Phaseolus vulgaris
Phvul.009G112450 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17359222-17364221 Phaseolus vulgaris
Phvul.009G112450 10.0kb upstream 10.0kb upstream 24067 true Chr09: 17335155-17359221 Phaseolus vulgaris
Phvul.009G112450 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17335155-17345154 Phaseolus vulgaris
Phvul.009G112450 10.0kb downstream 10.0kb downstream 24067 true Chr09: 17345155-17369221 Phaseolus vulgaris
Phvul.009G112450 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17359222-17369221 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122303463 5265 Fabidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.42284 0.0 17.5618   Low
cufflinks 13.8315 0.0 35.9625    
cufflinks 11.0835 0.0 29.1036    
cufflinks 10.7766 0.0 28.4633    
cufflinks 10.049 0.0 26.7082    
cufflinks 9.77625 0.0 25.8564    
cufflinks 11.3774 0.0 29.8106    
cufflinks 22.8941 0.0 59.2774   High
cufflinks 11.6696 0.0 30.5475    
cufflinks 10.2121 0.0 26.9755    
cufflinks 14.4361 0.0 37.5476    

0 Strain