Gene : Phvul.009G115800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32002:SF3 - PROTEIN NLP1-RELATED Genomic Order:  1192
Name:  ? Phvul.009G115800 Secondary Identifier:  ? PAC:37150211
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G115800 0.5kb upstream 0.5kb upstream 3983 true Chr09: 17846862-17850844 Phaseolus vulgaris
Phvul.009G115800 0.5kb upstream 0.5kb upstream 500 false Chr09: 17850345-17850844 Phaseolus vulgaris
Phvul.009G115800 0.5kb downstream 0.5kb downstream 3983 true Chr09: 17846362-17850344 Phaseolus vulgaris
Phvul.009G115800 0.5kb downstream 0.5kb downstream 500 false Chr09: 17846362-17846861 Phaseolus vulgaris
Phvul.009G115800 1.0kb upstream 1.0kb upstream 4483 true Chr09: 17846862-17851344 Phaseolus vulgaris
Phvul.009G115800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17850345-17851344 Phaseolus vulgaris
Phvul.009G115800 1.0kb downstream 1.0kb downstream 4483 true Chr09: 17845862-17850344 Phaseolus vulgaris
Phvul.009G115800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17845862-17846861 Phaseolus vulgaris
Phvul.009G115800 2.0kb upstream 2.0kb upstream 5483 true Chr09: 17846862-17852344 Phaseolus vulgaris
Phvul.009G115800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17850345-17852344 Phaseolus vulgaris
Phvul.009G115800 2.0kb downstream 2.0kb downstream 5483 true Chr09: 17844862-17850344 Phaseolus vulgaris
Phvul.009G115800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17844862-17846861 Phaseolus vulgaris
Phvul.009G115800 5.0kb upstream 5.0kb upstream 8483 true Chr09: 17846862-17855344 Phaseolus vulgaris
Phvul.009G115800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17850345-17855344 Phaseolus vulgaris
Phvul.009G115800 5.0kb downstream 5.0kb downstream 8483 true Chr09: 17841862-17850344 Phaseolus vulgaris
Phvul.009G115800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17841862-17846861 Phaseolus vulgaris
Phvul.009G115800 10.0kb upstream 10.0kb upstream 13483 true Chr09: 17846862-17860344 Phaseolus vulgaris
Phvul.009G115800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17850345-17860344 Phaseolus vulgaris
Phvul.009G115800 10.0kb downstream 10.0kb downstream 13483 true Chr09: 17836862-17850344 Phaseolus vulgaris
Phvul.009G115800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17836862-17846861 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297650 5265 Fabidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117085 0.0 0.45961 Low  
cufflinks 0.0630082 0.0 0.25953 Low  
cufflinks 0.0670894 0.0 0.274961 Low  
cufflinks 0.0918757 0.0 0.368347 Low  
cufflinks 0.0976902 0.0 0.389263 Low  
cufflinks 0.0984733 0.0 0.391212 Low  
cufflinks 12.3519 0.0 31.9279   High
cufflinks 92.671 0.0 282.773 High High
cufflinks 2.00257 0.0 5.87174    
cufflinks 0.0716785 0.0 0.292705 Low  
cufflinks 0.0774982 0.0 0.314243 Low  

0 Strain