Gene : Phvul.009G114900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11206:SF92 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1183
Name:  ? Phvul.009G114900 Secondary Identifier:  ? PAC:37150896
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G114900 0.5kb upstream 0.5kb upstream 2646 true Chr09: 17712531-17715176 Phaseolus vulgaris
Phvul.009G114900 0.5kb upstream 0.5kb upstream 500 false Chr09: 17712531-17713030 Phaseolus vulgaris
Phvul.009G114900 0.5kb downstream 0.5kb downstream 2646 true Chr09: 17713031-17715676 Phaseolus vulgaris
Phvul.009G114900 0.5kb downstream 0.5kb downstream 500 false Chr09: 17715177-17715676 Phaseolus vulgaris
Phvul.009G114900 1.0kb upstream 1.0kb upstream 3146 true Chr09: 17712031-17715176 Phaseolus vulgaris
Phvul.009G114900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17712031-17713030 Phaseolus vulgaris
Phvul.009G114900 1.0kb downstream 1.0kb downstream 3146 true Chr09: 17713031-17716176 Phaseolus vulgaris
Phvul.009G114900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17715177-17716176 Phaseolus vulgaris
Phvul.009G114900 2.0kb upstream 2.0kb upstream 4146 true Chr09: 17711031-17715176 Phaseolus vulgaris
Phvul.009G114900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17711031-17713030 Phaseolus vulgaris
Phvul.009G114900 2.0kb downstream 2.0kb downstream 4146 true Chr09: 17713031-17717176 Phaseolus vulgaris
Phvul.009G114900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17715177-17717176 Phaseolus vulgaris
Phvul.009G114900 5.0kb upstream 5.0kb upstream 7146 true Chr09: 17708031-17715176 Phaseolus vulgaris
Phvul.009G114900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17708031-17713030 Phaseolus vulgaris
Phvul.009G114900 5.0kb downstream 5.0kb downstream 7146 true Chr09: 17713031-17720176 Phaseolus vulgaris
Phvul.009G114900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17715177-17720176 Phaseolus vulgaris
Phvul.009G114900 10.0kb upstream 10.0kb upstream 12146 true Chr09: 17703031-17715176 Phaseolus vulgaris
Phvul.009G114900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17703031-17713030 Phaseolus vulgaris
Phvul.009G114900 10.0kb downstream 10.0kb downstream 12146 true Chr09: 17713031-17725176 Phaseolus vulgaris
Phvul.009G114900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17715177-17725176 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313961 5265 Fabidae View MSA
124064495 5270 Rosid View MSA
123738593 5271 Pentapetalae View MSA
122792210 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.56684 0.0 13.2194   High
cufflinks 1.47525 0.0 4.87016    
cufflinks 0.138406 0.0 0.567249 Low  
cufflinks 0.299292 0.0 1.13657 Low  
cufflinks 1.59806 0.0 5.15282    
cufflinks 0.351006 0.0 1.33474 Low  
cufflinks 0.343945 0.0 1.29657 Low  
cufflinks 0.0465441 0.0 0.20963 Low Low
cufflinks 0.445233 0.0 1.6465 Low  
cufflinks 0.0784151 0.0 0.336038 Low Low
cufflinks 2.41655 0.0 7.48334   High

0 Strain