Gene : Phvul.009G103400 P. vulgaris v2.1
Defline:  (1 of 1) K02738 - 20S proteasome subunit beta 1 (PSMB6) Genomic Order:  1066
Name:  ? Phvul.009G103400 Secondary Identifier:  ? PAC:37149779
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G103400 0.5kb upstream 0.5kb upstream 4843 true Chr09: 16131156-16135998 Phaseolus vulgaris
Phvul.009G103400 0.5kb upstream 0.5kb upstream 500 false Chr09: 16131156-16131655 Phaseolus vulgaris
Phvul.009G103400 0.5kb downstream 0.5kb downstream 4843 true Chr09: 16131656-16136498 Phaseolus vulgaris
Phvul.009G103400 0.5kb downstream 0.5kb downstream 500 false Chr09: 16135999-16136498 Phaseolus vulgaris
Phvul.009G103400 1.0kb upstream 1.0kb upstream 5343 true Chr09: 16130656-16135998 Phaseolus vulgaris
Phvul.009G103400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16130656-16131655 Phaseolus vulgaris
Phvul.009G103400 1.0kb downstream 1.0kb downstream 5343 true Chr09: 16131656-16136998 Phaseolus vulgaris
Phvul.009G103400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16135999-16136998 Phaseolus vulgaris
Phvul.009G103400 2.0kb upstream 2.0kb upstream 6343 true Chr09: 16129656-16135998 Phaseolus vulgaris
Phvul.009G103400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16129656-16131655 Phaseolus vulgaris
Phvul.009G103400 2.0kb downstream 2.0kb downstream 6343 true Chr09: 16131656-16137998 Phaseolus vulgaris
Phvul.009G103400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16135999-16137998 Phaseolus vulgaris
Phvul.009G103400 5.0kb upstream 5.0kb upstream 9343 true Chr09: 16126656-16135998 Phaseolus vulgaris
Phvul.009G103400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16126656-16131655 Phaseolus vulgaris
Phvul.009G103400 5.0kb downstream 5.0kb downstream 9343 true Chr09: 16131656-16140998 Phaseolus vulgaris
Phvul.009G103400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16135999-16140998 Phaseolus vulgaris
Phvul.009G103400 10.0kb upstream 10.0kb upstream 14343 true Chr09: 16121656-16135998 Phaseolus vulgaris
Phvul.009G103400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16121656-16131655 Phaseolus vulgaris
Phvul.009G103400 10.0kb downstream 10.0kb downstream 14343 true Chr09: 16131656-16145998 Phaseolus vulgaris
Phvul.009G103400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16135999-16145998 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308498 5265 Fabidae View MSA
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 114.496 0.0 310.589 High  
cufflinks 112.962 0.0 304.789 High  
cufflinks 72.6053 0.0 190.037 High Low
cufflinks 139.058 0.0 380.706 High High
cufflinks 94.1769 0.0 250.186 High  
cufflinks 81.5864 0.0 214.971 High  
cufflinks 89.7022 0.0 238.002 High  
cufflinks 91.8247 0.0 244.089 High  
cufflinks 113.946 0.0 307.492 High  
cufflinks 71.1393 0.0 185.961 High Low
cufflinks 118.564 0.0 320.597 High  

0 Strain