Gene : Phvul.006G210000 P. vulgaris v2.1
Defline:  (1 of 74) PF00892 - EamA-like transporter family (EamA) Genomic Order:  2116
Name:  ? Phvul.006G210000 Secondary Identifier:  ? PAC:37172692
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G210000 0.5kb upstream 0.5kb upstream 5585 true Chr06: 30399261-30404845 Phaseolus vulgaris
Phvul.006G210000 0.5kb upstream 0.5kb upstream 500 false Chr06: 30399261-30399760 Phaseolus vulgaris
Phvul.006G210000 0.5kb downstream 0.5kb downstream 5585 true Chr06: 30399761-30405345 Phaseolus vulgaris
Phvul.006G210000 0.5kb downstream 0.5kb downstream 500 false Chr06: 30404846-30405345 Phaseolus vulgaris
Phvul.006G210000 1.0kb upstream 1.0kb upstream 6085 true Chr06: 30398761-30404845 Phaseolus vulgaris
Phvul.006G210000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30398761-30399760 Phaseolus vulgaris
Phvul.006G210000 1.0kb downstream 1.0kb downstream 6085 true Chr06: 30399761-30405845 Phaseolus vulgaris
Phvul.006G210000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30404846-30405845 Phaseolus vulgaris
Phvul.006G210000 2.0kb upstream 2.0kb upstream 7085 true Chr06: 30397761-30404845 Phaseolus vulgaris
Phvul.006G210000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30397761-30399760 Phaseolus vulgaris
Phvul.006G210000 2.0kb downstream 2.0kb downstream 7085 true Chr06: 30399761-30406845 Phaseolus vulgaris
Phvul.006G210000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30404846-30406845 Phaseolus vulgaris
Phvul.006G210000 5.0kb upstream 5.0kb upstream 10085 true Chr06: 30394761-30404845 Phaseolus vulgaris
Phvul.006G210000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30394761-30399760 Phaseolus vulgaris
Phvul.006G210000 5.0kb downstream 5.0kb downstream 10085 true Chr06: 30399761-30409845 Phaseolus vulgaris
Phvul.006G210000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30404846-30409845 Phaseolus vulgaris
Phvul.006G210000 10.0kb upstream 10.0kb upstream 15085 true Chr06: 30389761-30404845 Phaseolus vulgaris
Phvul.006G210000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30389761-30399760 Phaseolus vulgaris
Phvul.006G210000 10.0kb downstream 10.0kb downstream 15085 true Chr06: 30399761-30414845 Phaseolus vulgaris
Phvul.006G210000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30404846-30414845 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313010 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0260585 0.0 0.129146 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.673794 0.0 2.50415   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0677996 0.0 0.304283 Low  
cufflinks 0.0297444 0.0 0.145674 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.066486 0.0 0.300416 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0534377 0.0 0.246197 Low  

0 Strain