Gene : Phvul.006G210300 P. vulgaris v2.1
Defline:  (1 of 74) PF00892 - EamA-like transporter family (EamA) Genomic Order:  2119
Name:  ? Phvul.006G210300 Secondary Identifier:  ? PAC:37173425
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G210300 0.5kb upstream 0.5kb upstream 2880 true Chr06: 30433137-30436016 Phaseolus vulgaris
Phvul.006G210300 0.5kb upstream 0.5kb upstream 500 false Chr06: 30433137-30433636 Phaseolus vulgaris
Phvul.006G210300 0.5kb downstream 0.5kb downstream 2880 true Chr06: 30433637-30436516 Phaseolus vulgaris
Phvul.006G210300 0.5kb downstream 0.5kb downstream 500 false Chr06: 30436017-30436516 Phaseolus vulgaris
Phvul.006G210300 1.0kb upstream 1.0kb upstream 3380 true Chr06: 30432637-30436016 Phaseolus vulgaris
Phvul.006G210300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30432637-30433636 Phaseolus vulgaris
Phvul.006G210300 1.0kb downstream 1.0kb downstream 3380 true Chr06: 30433637-30437016 Phaseolus vulgaris
Phvul.006G210300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30436017-30437016 Phaseolus vulgaris
Phvul.006G210300 2.0kb upstream 2.0kb upstream 4380 true Chr06: 30431637-30436016 Phaseolus vulgaris
Phvul.006G210300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30431637-30433636 Phaseolus vulgaris
Phvul.006G210300 2.0kb downstream 2.0kb downstream 4380 true Chr06: 30433637-30438016 Phaseolus vulgaris
Phvul.006G210300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30436017-30438016 Phaseolus vulgaris
Phvul.006G210300 5.0kb upstream 5.0kb upstream 7380 true Chr06: 30428637-30436016 Phaseolus vulgaris
Phvul.006G210300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30428637-30433636 Phaseolus vulgaris
Phvul.006G210300 5.0kb downstream 5.0kb downstream 7380 true Chr06: 30433637-30441016 Phaseolus vulgaris
Phvul.006G210300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30436017-30441016 Phaseolus vulgaris
Phvul.006G210300 10.0kb upstream 10.0kb upstream 12380 true Chr06: 30423637-30436016 Phaseolus vulgaris
Phvul.006G210300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30423637-30433636 Phaseolus vulgaris
Phvul.006G210300 10.0kb downstream 10.0kb downstream 12380 true Chr06: 30433637-30446016 Phaseolus vulgaris
Phvul.006G210300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30436017-30446016 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313010 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2797 0.0 80.8805   High
cufflinks 4.43878 0.0 13.0386    
cufflinks 2.04305 0.0 6.55001    
cufflinks 3.41897 0.0 10.4415    
cufflinks 1.82188 0.0 5.97669    
cufflinks 1.70733 0.0 5.58948   Low
cufflinks 3.43572 0.0 10.4015    
cufflinks 1.98761 0.0 6.382    
cufflinks 5.05943 0.0 14.6959    
cufflinks 7.83761 0.0 21.7954    
cufflinks 5.1078 0.0 14.8607    

0 Strain