Gene : Phvul.009G105600 P. vulgaris v2.1
Defline:  (1 of 2) K03978 - GTP-binding protein (engB) Genomic Order:  1089
Name:  ? Phvul.009G105600 Secondary Identifier:  ? PAC:37148829
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G105600 0.5kb upstream 0.5kb upstream 4229 true Chr09: 16407994-16412222 Phaseolus vulgaris
Phvul.009G105600 0.5kb upstream 0.5kb upstream 500 false Chr09: 16411723-16412222 Phaseolus vulgaris
Phvul.009G105600 0.5kb downstream 0.5kb downstream 4229 true Chr09: 16407494-16411722 Phaseolus vulgaris
Phvul.009G105600 0.5kb downstream 0.5kb downstream 500 false Chr09: 16407494-16407993 Phaseolus vulgaris
Phvul.009G105600 1.0kb upstream 1.0kb upstream 4729 true Chr09: 16407994-16412722 Phaseolus vulgaris
Phvul.009G105600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16411723-16412722 Phaseolus vulgaris
Phvul.009G105600 1.0kb downstream 1.0kb downstream 4729 true Chr09: 16406994-16411722 Phaseolus vulgaris
Phvul.009G105600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16406994-16407993 Phaseolus vulgaris
Phvul.009G105600 2.0kb upstream 2.0kb upstream 5729 true Chr09: 16407994-16413722 Phaseolus vulgaris
Phvul.009G105600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16411723-16413722 Phaseolus vulgaris
Phvul.009G105600 2.0kb downstream 2.0kb downstream 5729 true Chr09: 16405994-16411722 Phaseolus vulgaris
Phvul.009G105600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16405994-16407993 Phaseolus vulgaris
Phvul.009G105600 5.0kb upstream 5.0kb upstream 8729 true Chr09: 16407994-16416722 Phaseolus vulgaris
Phvul.009G105600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16411723-16416722 Phaseolus vulgaris
Phvul.009G105600 5.0kb downstream 5.0kb downstream 8729 true Chr09: 16402994-16411722 Phaseolus vulgaris
Phvul.009G105600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16402994-16407993 Phaseolus vulgaris
Phvul.009G105600 10.0kb upstream 10.0kb upstream 13729 true Chr09: 16407994-16421722 Phaseolus vulgaris
Phvul.009G105600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16411723-16421722 Phaseolus vulgaris
Phvul.009G105600 10.0kb downstream 10.0kb downstream 13729 true Chr09: 16397994-16411722 Phaseolus vulgaris
Phvul.009G105600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16397994-16407993 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302742 5265 Fabidae View MSA
124074184 5270 Rosid View MSA
123739065 5271 Pentapetalae View MSA
122788793 5272 Eudicot View MSA
122045956 5273 Angiosperm View MSA
121345764 5274 Embryophyte View MSA
123427955 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4567 0.0 46.0064    
cufflinks 16.8026 0.0 44.5074    
cufflinks 33.7974 0.0 87.3616   High
cufflinks 12.4336 0.0 33.5839    
cufflinks 11.3091 0.0 30.8809    
cufflinks 40.2894 0.0 104.243 High High
cufflinks 8.34636 0.0 23.3755    
cufflinks 7.39006 0.0 20.9067   Low
cufflinks 5.91858 0.0 17.1725   Low
cufflinks 15.6905 0.0 41.7327    
cufflinks 10.9784 0.0 30.1015    

0 Strain