Gene : Phvul.006G213700 P. vulgaris v2.1
Defline:  (1 of 2) 2.3.1.199//6.2.1.2 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  2156
Name:  ? Phvul.006G213700 Secondary Identifier:  ? PAC:37173816
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Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1121 Phaseolus vulgaris pathologic  
Pvulgaris PWY-321 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5080 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5136 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5143 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5147 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5885 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5971 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5989 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6598 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6733 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6803 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7619 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G213700 0.5kb upstream 0.5kb upstream 1713 true Chr06: 30694657-30696369 Phaseolus vulgaris
Phvul.006G213700 0.5kb upstream 0.5kb upstream 500 false Chr06: 30694657-30695156 Phaseolus vulgaris
Phvul.006G213700 0.5kb downstream 0.5kb downstream 1713 true Chr06: 30695157-30696869 Phaseolus vulgaris
Phvul.006G213700 0.5kb downstream 0.5kb downstream 500 false Chr06: 30696370-30696869 Phaseolus vulgaris
Phvul.006G213700 1.0kb upstream 1.0kb upstream 2213 true Chr06: 30694157-30696369 Phaseolus vulgaris
Phvul.006G213700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30694157-30695156 Phaseolus vulgaris
Phvul.006G213700 1.0kb downstream 1.0kb downstream 2213 true Chr06: 30695157-30697369 Phaseolus vulgaris
Phvul.006G213700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30696370-30697369 Phaseolus vulgaris
Phvul.006G213700 2.0kb upstream 2.0kb upstream 3213 true Chr06: 30693157-30696369 Phaseolus vulgaris
Phvul.006G213700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30693157-30695156 Phaseolus vulgaris
Phvul.006G213700 2.0kb downstream 2.0kb downstream 3213 true Chr06: 30695157-30698369 Phaseolus vulgaris
Phvul.006G213700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30696370-30698369 Phaseolus vulgaris
Phvul.006G213700 5.0kb upstream 5.0kb upstream 6213 true Chr06: 30690157-30696369 Phaseolus vulgaris
Phvul.006G213700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30690157-30695156 Phaseolus vulgaris
Phvul.006G213700 5.0kb downstream 5.0kb downstream 6213 true Chr06: 30695157-30701369 Phaseolus vulgaris
Phvul.006G213700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30696370-30701369 Phaseolus vulgaris
Phvul.006G213700 10.0kb upstream 10.0kb upstream 11213 true Chr06: 30685157-30696369 Phaseolus vulgaris
Phvul.006G213700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30685157-30695156 Phaseolus vulgaris
Phvul.006G213700 10.0kb downstream 10.0kb downstream 11213 true Chr06: 30695157-30706369 Phaseolus vulgaris
Phvul.006G213700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30696370-30706369 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307468 5265 Fabidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.84735 0.0 26.5765    
cufflinks 28.8831 0.0 77.3112   High
cufflinks 33.6427 0.0 89.013   High
cufflinks 12.8828 0.0 36.1791    
cufflinks 17.352 0.0 48.0632    
cufflinks 39.0041 0.0 102.309 High High
cufflinks 7.18014 0.0 21.8801    
cufflinks 5.50428 0.0 17.4989   Low
cufflinks 7.39191 0.0 22.5226    
cufflinks 9.32746 0.0 27.7832    
cufflinks 17.6017 0.0 48.9129    

0 Strain