Gene : Phvul.009G104100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22952//PTHR22952:SF113 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1073
Name:  ? Phvul.009G104100 Secondary Identifier:  ? PAC:37150651
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G104100 0.5kb upstream 0.5kb upstream 5343 true Chr09: 16194681-16200023 Phaseolus vulgaris
Phvul.009G104100 0.5kb upstream 0.5kb upstream 500 false Chr09: 16199524-16200023 Phaseolus vulgaris
Phvul.009G104100 0.5kb downstream 0.5kb downstream 5343 true Chr09: 16194181-16199523 Phaseolus vulgaris
Phvul.009G104100 0.5kb downstream 0.5kb downstream 500 false Chr09: 16194181-16194680 Phaseolus vulgaris
Phvul.009G104100 1.0kb upstream 1.0kb upstream 5843 true Chr09: 16194681-16200523 Phaseolus vulgaris
Phvul.009G104100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16199524-16200523 Phaseolus vulgaris
Phvul.009G104100 1.0kb downstream 1.0kb downstream 5843 true Chr09: 16193681-16199523 Phaseolus vulgaris
Phvul.009G104100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16193681-16194680 Phaseolus vulgaris
Phvul.009G104100 2.0kb upstream 2.0kb upstream 6843 true Chr09: 16194681-16201523 Phaseolus vulgaris
Phvul.009G104100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16199524-16201523 Phaseolus vulgaris
Phvul.009G104100 2.0kb downstream 2.0kb downstream 6843 true Chr09: 16192681-16199523 Phaseolus vulgaris
Phvul.009G104100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16192681-16194680 Phaseolus vulgaris
Phvul.009G104100 5.0kb upstream 5.0kb upstream 9843 true Chr09: 16194681-16204523 Phaseolus vulgaris
Phvul.009G104100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16199524-16204523 Phaseolus vulgaris
Phvul.009G104100 5.0kb downstream 5.0kb downstream 9843 true Chr09: 16189681-16199523 Phaseolus vulgaris
Phvul.009G104100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16189681-16194680 Phaseolus vulgaris
Phvul.009G104100 10.0kb upstream 10.0kb upstream 14843 true Chr09: 16194681-16209523 Phaseolus vulgaris
Phvul.009G104100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16199524-16209523 Phaseolus vulgaris
Phvul.009G104100 10.0kb downstream 10.0kb downstream 14843 true Chr09: 16184681-16199523 Phaseolus vulgaris
Phvul.009G104100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16184681-16194680 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029163 5273 Angiosperm View MSA
122312182 5265 Fabidae View MSA
124062967 5270 Rosid View MSA
123747732 5271 Pentapetalae View MSA
122794989 5272 Eudicot View MSA
123428913 5275 Viridiplantae View MSA
121298544 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.157 0.0 50.4014    
cufflinks 17.9478 0.0 47.4091    
cufflinks 6.81151 0.0 19.5467   Low
cufflinks 50.4461 0.0 131.151 High  
cufflinks 19.576 0.0 51.5478    
cufflinks 14.2295 0.0 38.1848    
cufflinks 62.5716 0.0 164.364 High  
cufflinks 113.026 0.0 311.009 High High
cufflinks 59.9987 0.0 157.308 High  
cufflinks 10.2291 0.0 28.29   Low
cufflinks 38.1065 0.0 98.5096 High  

0 Strain