Gene : Phvul.006G212401 P. vulgaris v2.1
Defline:  (1 of 1) 3.4.22.49 - Separase / Separin Genomic Order:  2137
Name:  ? Phvul.006G212401 Secondary Identifier:  ? PAC:37171715
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G212401 0.5kb upstream 0.5kb upstream 25201 true Chr06: 30539425-30564625 Phaseolus vulgaris
Phvul.006G212401 0.5kb upstream 0.5kb upstream 500 false Chr06: 30564126-30564625 Phaseolus vulgaris
Phvul.006G212401 0.5kb downstream 0.5kb downstream 25201 true Chr06: 30538925-30564125 Phaseolus vulgaris
Phvul.006G212401 0.5kb downstream 0.5kb downstream 500 false Chr06: 30538925-30539424 Phaseolus vulgaris
Phvul.006G212401 1.0kb upstream 1.0kb upstream 25701 true Chr06: 30539425-30565125 Phaseolus vulgaris
Phvul.006G212401 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30564126-30565125 Phaseolus vulgaris
Phvul.006G212401 1.0kb downstream 1.0kb downstream 25701 true Chr06: 30538425-30564125 Phaseolus vulgaris
Phvul.006G212401 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30538425-30539424 Phaseolus vulgaris
Phvul.006G212401 2.0kb upstream 2.0kb upstream 26701 true Chr06: 30539425-30566125 Phaseolus vulgaris
Phvul.006G212401 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30564126-30566125 Phaseolus vulgaris
Phvul.006G212401 2.0kb downstream 2.0kb downstream 26701 true Chr06: 30537425-30564125 Phaseolus vulgaris
Phvul.006G212401 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30537425-30539424 Phaseolus vulgaris
Phvul.006G212401 5.0kb upstream 5.0kb upstream 29701 true Chr06: 30539425-30569125 Phaseolus vulgaris
Phvul.006G212401 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30564126-30569125 Phaseolus vulgaris
Phvul.006G212401 5.0kb downstream 5.0kb downstream 29701 true Chr06: 30534425-30564125 Phaseolus vulgaris
Phvul.006G212401 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30534425-30539424 Phaseolus vulgaris
Phvul.006G212401 10.0kb upstream 10.0kb upstream 34701 true Chr06: 30539425-30574125 Phaseolus vulgaris
Phvul.006G212401 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30564126-30574125 Phaseolus vulgaris
Phvul.006G212401 10.0kb downstream 10.0kb downstream 34701 true Chr06: 30529425-30564125 Phaseolus vulgaris
Phvul.006G212401 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30529425-30539424 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300266 5265 Fabidae View MSA
124073860 5270 Rosid View MSA
123739769 5271 Pentapetalae View MSA
122789047 5272 Eudicot View MSA
122049193 5273 Angiosperm View MSA
121346521 5274 Embryophyte View MSA
123380397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.277989 0.0 1.13546 Low Low
cufflinks 1.33756 0.0 4.5734    
cufflinks 0.480515 0.0 1.67806 Low  
cufflinks 0.339356 0.0 1.35563 Low Low
cufflinks 1.30062 0.0 4.53476    
cufflinks 1.53798 0.0 5.16704    
cufflinks 1.85601 0.0 6.08028   High
cufflinks 1.54677 0.0 5.31216    
cufflinks 1.809 0.0 5.98122    
cufflinks 0.29314 0.0 1.17346 Low Low
cufflinks 0.849867 0.0 2.68956    

0 Strain