Gene : Phvul.009G104800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24058:SF44 - SERINE/THREONINE-PROTEIN KINASE AFC1 Genomic Order:  1080
Name:  ? Phvul.009G104800 Secondary Identifier:  ? PAC:37151297
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G104800 0.5kb upstream 0.5kb upstream 4445 true Chr09: 16267839-16272283 Phaseolus vulgaris
Phvul.009G104800 0.5kb upstream 0.5kb upstream 500 false Chr09: 16271784-16272283 Phaseolus vulgaris
Phvul.009G104800 0.5kb downstream 0.5kb downstream 4445 true Chr09: 16267339-16271783 Phaseolus vulgaris
Phvul.009G104800 0.5kb downstream 0.5kb downstream 500 false Chr09: 16267339-16267838 Phaseolus vulgaris
Phvul.009G104800 1.0kb upstream 1.0kb upstream 4945 true Chr09: 16267839-16272783 Phaseolus vulgaris
Phvul.009G104800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16271784-16272783 Phaseolus vulgaris
Phvul.009G104800 1.0kb downstream 1.0kb downstream 4945 true Chr09: 16266839-16271783 Phaseolus vulgaris
Phvul.009G104800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16266839-16267838 Phaseolus vulgaris
Phvul.009G104800 2.0kb upstream 2.0kb upstream 5945 true Chr09: 16267839-16273783 Phaseolus vulgaris
Phvul.009G104800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16271784-16273783 Phaseolus vulgaris
Phvul.009G104800 2.0kb downstream 2.0kb downstream 5945 true Chr09: 16265839-16271783 Phaseolus vulgaris
Phvul.009G104800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16265839-16267838 Phaseolus vulgaris
Phvul.009G104800 5.0kb upstream 5.0kb upstream 8945 true Chr09: 16267839-16276783 Phaseolus vulgaris
Phvul.009G104800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16271784-16276783 Phaseolus vulgaris
Phvul.009G104800 5.0kb downstream 5.0kb downstream 8945 true Chr09: 16262839-16271783 Phaseolus vulgaris
Phvul.009G104800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16262839-16267838 Phaseolus vulgaris
Phvul.009G104800 10.0kb upstream 10.0kb upstream 13945 true Chr09: 16267839-16281783 Phaseolus vulgaris
Phvul.009G104800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16271784-16281783 Phaseolus vulgaris
Phvul.009G104800 10.0kb downstream 10.0kb downstream 13945 true Chr09: 16257839-16271783 Phaseolus vulgaris
Phvul.009G104800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16257839-16267838 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302698 5265 Fabidae View MSA
124060771 5270 Rosid View MSA
123738736 5271 Pentapetalae View MSA
122792665 5272 Eudicot View MSA
122044731 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.36606 0.0 18.7557    
cufflinks 7.10761 0.0 29.13    
cufflinks 24.9912 0.0 88.2272   High
cufflinks 4.64175 0.0 17.2439   Low
cufflinks 6.5054 0.0 25.7163    
cufflinks 8.9567 0.0 32.8321    
cufflinks 10.7768 0.0 44.0395    
cufflinks 11.5575 0.0 47.1103    
cufflinks 7.98453 0.0 30.0227    
cufflinks 8.38817 0.0 31.1962    
cufflinks 6.20581 0.0 21.2254    

0 Strain