Gene : Phvul.009G106300 P. vulgaris v2.1
Defline:  (1 of 1) K09595 - minor histocompatibility antigen H13 [EC:3.4.23.-] (HM13) Genomic Order:  1097
Name:  ? Phvul.009G106300 Secondary Identifier:  ? PAC:37150625
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G106300 0.5kb upstream 0.5kb upstream 5781 true Chr09: 16494227-16500007 Phaseolus vulgaris
Phvul.009G106300 0.5kb upstream 0.5kb upstream 500 false Chr09: 16494227-16494726 Phaseolus vulgaris
Phvul.009G106300 0.5kb downstream 0.5kb downstream 5781 true Chr09: 16494727-16500507 Phaseolus vulgaris
Phvul.009G106300 0.5kb downstream 0.5kb downstream 500 false Chr09: 16500008-16500507 Phaseolus vulgaris
Phvul.009G106300 1.0kb upstream 1.0kb upstream 6281 true Chr09: 16493727-16500007 Phaseolus vulgaris
Phvul.009G106300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16493727-16494726 Phaseolus vulgaris
Phvul.009G106300 1.0kb downstream 1.0kb downstream 6281 true Chr09: 16494727-16501007 Phaseolus vulgaris
Phvul.009G106300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16500008-16501007 Phaseolus vulgaris
Phvul.009G106300 2.0kb upstream 2.0kb upstream 7281 true Chr09: 16492727-16500007 Phaseolus vulgaris
Phvul.009G106300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16492727-16494726 Phaseolus vulgaris
Phvul.009G106300 2.0kb downstream 2.0kb downstream 7281 true Chr09: 16494727-16502007 Phaseolus vulgaris
Phvul.009G106300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16500008-16502007 Phaseolus vulgaris
Phvul.009G106300 5.0kb upstream 5.0kb upstream 10281 true Chr09: 16489727-16500007 Phaseolus vulgaris
Phvul.009G106300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16489727-16494726 Phaseolus vulgaris
Phvul.009G106300 5.0kb downstream 5.0kb downstream 10281 true Chr09: 16494727-16505007 Phaseolus vulgaris
Phvul.009G106300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16500008-16505007 Phaseolus vulgaris
Phvul.009G106300 10.0kb upstream 10.0kb upstream 15281 true Chr09: 16484727-16500007 Phaseolus vulgaris
Phvul.009G106300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16484727-16494726 Phaseolus vulgaris
Phvul.009G106300 10.0kb downstream 10.0kb downstream 15281 true Chr09: 16494727-16510007 Phaseolus vulgaris
Phvul.009G106300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16500008-16510007 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305382 5265 Fabidae View MSA
124062254 5270 Rosid View MSA
123736770 5271 Pentapetalae View MSA
122793360 5272 Eudicot View MSA
122042427 5273 Angiosperm View MSA
121351308 5274 Embryophyte View MSA
123428175 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.0443 0.0 184.116 High High
cufflinks 49.4447 0.0 160.167 High  
cufflinks 32.4864 0.0 106.046   Low
cufflinks 59.9328 0.0 195.876 High High
cufflinks 45.9035 0.0 149.49 High  
cufflinks 36.2543 0.0 117.249 High Low
cufflinks 37.8699 0.0 124.758 High  
cufflinks 54.6507 0.0 177.666 High  
cufflinks 57.0128 0.0 184.91 High High
cufflinks 39.1592 0.0 127.205 High  
cufflinks 41.2562 0.0 134.667 High  

0 Strain