Gene : Phvul.006G215100 P. vulgaris v2.1
Defline:  (1 of 1) K14571 - ribosome biogenesis ATPase (RIX7, NVL) Genomic Order:  2169
Name:  ? Phvul.006G215100 Secondary Identifier:  ? PAC:37173626
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G215100 0.5kb upstream 0.5kb upstream 5372 true Chr06: 30776707-30782078 Phaseolus vulgaris
Phvul.006G215100 0.5kb upstream 0.5kb upstream 500 false Chr06: 30781579-30782078 Phaseolus vulgaris
Phvul.006G215100 0.5kb downstream 0.5kb downstream 5372 true Chr06: 30776207-30781578 Phaseolus vulgaris
Phvul.006G215100 0.5kb downstream 0.5kb downstream 500 false Chr06: 30776207-30776706 Phaseolus vulgaris
Phvul.006G215100 1.0kb upstream 1.0kb upstream 5872 true Chr06: 30776707-30782578 Phaseolus vulgaris
Phvul.006G215100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30781579-30782578 Phaseolus vulgaris
Phvul.006G215100 1.0kb downstream 1.0kb downstream 5872 true Chr06: 30775707-30781578 Phaseolus vulgaris
Phvul.006G215100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30775707-30776706 Phaseolus vulgaris
Phvul.006G215100 2.0kb upstream 2.0kb upstream 6872 true Chr06: 30776707-30783578 Phaseolus vulgaris
Phvul.006G215100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30781579-30783578 Phaseolus vulgaris
Phvul.006G215100 2.0kb downstream 2.0kb downstream 6872 true Chr06: 30774707-30781578 Phaseolus vulgaris
Phvul.006G215100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30774707-30776706 Phaseolus vulgaris
Phvul.006G215100 5.0kb upstream 5.0kb upstream 9872 true Chr06: 30776707-30786578 Phaseolus vulgaris
Phvul.006G215100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30781579-30786578 Phaseolus vulgaris
Phvul.006G215100 5.0kb downstream 5.0kb downstream 9872 true Chr06: 30771707-30781578 Phaseolus vulgaris
Phvul.006G215100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30771707-30776706 Phaseolus vulgaris
Phvul.006G215100 10.0kb upstream 10.0kb upstream 14872 true Chr06: 30776707-30791578 Phaseolus vulgaris
Phvul.006G215100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30781579-30791578 Phaseolus vulgaris
Phvul.006G215100 10.0kb downstream 10.0kb downstream 14872 true Chr06: 30766707-30781578 Phaseolus vulgaris
Phvul.006G215100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30766707-30776706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305254 5265 Fabidae View MSA
124062376 5270 Rosid View MSA
123741584 5271 Pentapetalae View MSA
122791851 5272 Eudicot View MSA
122045822 5273 Angiosperm View MSA
121351435 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.45417 0.0 19.5775   Low
cufflinks 13.0002 0.0 33.606    
cufflinks 9.90192 0.0 25.7277    
cufflinks 7.91722 0.0 20.8422   Low
cufflinks 11.42 0.0 29.5881    
cufflinks 10.7975 0.0 27.9706    
cufflinks 14.1694 0.0 36.6328    
cufflinks 14.1593 0.0 36.6053    
cufflinks 13.6849 0.0 35.3732    
cufflinks 16.0938 0.0 41.6484   High
cufflinks 11.7006 0.0 30.2801    

0 Strain