Gene : Phvul.006G213900 P. vulgaris v2.1
Defline:  (1 of 1) K10249 - elongation of very long chain fatty acids protein 4 (ELOVL4) Genomic Order:  2158
Name:  ? Phvul.006G213900 Secondary Identifier:  ? PAC:37172045
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5080 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6598 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7619 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G213900 0.5kb upstream 0.5kb upstream 1527 true Chr06: 30707014-30708540 Phaseolus vulgaris
Phvul.006G213900 0.5kb upstream 0.5kb upstream 500 false Chr06: 30707014-30707513 Phaseolus vulgaris
Phvul.006G213900 0.5kb downstream 0.5kb downstream 1527 true Chr06: 30707514-30709040 Phaseolus vulgaris
Phvul.006G213900 0.5kb downstream 0.5kb downstream 500 false Chr06: 30708541-30709040 Phaseolus vulgaris
Phvul.006G213900 1.0kb upstream 1.0kb upstream 2027 true Chr06: 30706514-30708540 Phaseolus vulgaris
Phvul.006G213900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30706514-30707513 Phaseolus vulgaris
Phvul.006G213900 1.0kb downstream 1.0kb downstream 2027 true Chr06: 30707514-30709540 Phaseolus vulgaris
Phvul.006G213900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30708541-30709540 Phaseolus vulgaris
Phvul.006G213900 2.0kb upstream 2.0kb upstream 3027 true Chr06: 30705514-30708540 Phaseolus vulgaris
Phvul.006G213900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30705514-30707513 Phaseolus vulgaris
Phvul.006G213900 2.0kb downstream 2.0kb downstream 3027 true Chr06: 30707514-30710540 Phaseolus vulgaris
Phvul.006G213900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30708541-30710540 Phaseolus vulgaris
Phvul.006G213900 5.0kb upstream 5.0kb upstream 6027 true Chr06: 30702514-30708540 Phaseolus vulgaris
Phvul.006G213900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30702514-30707513 Phaseolus vulgaris
Phvul.006G213900 5.0kb downstream 5.0kb downstream 6027 true Chr06: 30707514-30713540 Phaseolus vulgaris
Phvul.006G213900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30708541-30713540 Phaseolus vulgaris
Phvul.006G213900 10.0kb upstream 10.0kb upstream 11027 true Chr06: 30697514-30708540 Phaseolus vulgaris
Phvul.006G213900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30697514-30707513 Phaseolus vulgaris
Phvul.006G213900 10.0kb downstream 10.0kb downstream 11027 true Chr06: 30707514-30718540 Phaseolus vulgaris
Phvul.006G213900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30708541-30718540 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307099 5265 Fabidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.310322 0.0 1.28725 Low  
cufflinks 0.779372 0.0 2.99354    
cufflinks 49.5146 0.0 128.597 High High
cufflinks 0.227456 0.0 0.950657 Low  
cufflinks 2.63874 0.0 9.02478    
cufflinks 64.5131 0.0 166.786 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.126438 0.0 0.569465 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.59341 0.0 8.89792    

0 Strain