Gene : Phvul.006G214300 P. vulgaris v2.1
Defline:  (1 of 53) PF12937 - F-box-like (F-box-like) Genomic Order:  2161
Name:  ? Phvul.006G214300 Secondary Identifier:  ? PAC:37173510
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G214300 0.5kb upstream 0.5kb upstream 1952 true Chr06: 30728015-30729966 Phaseolus vulgaris
Phvul.006G214300 0.5kb upstream 0.5kb upstream 500 false Chr06: 30728015-30728514 Phaseolus vulgaris
Phvul.006G214300 0.5kb downstream 0.5kb downstream 1952 true Chr06: 30728515-30730466 Phaseolus vulgaris
Phvul.006G214300 0.5kb downstream 0.5kb downstream 500 false Chr06: 30729967-30730466 Phaseolus vulgaris
Phvul.006G214300 1.0kb upstream 1.0kb upstream 2452 true Chr06: 30727515-30729966 Phaseolus vulgaris
Phvul.006G214300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30727515-30728514 Phaseolus vulgaris
Phvul.006G214300 1.0kb downstream 1.0kb downstream 2452 true Chr06: 30728515-30730966 Phaseolus vulgaris
Phvul.006G214300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30729967-30730966 Phaseolus vulgaris
Phvul.006G214300 2.0kb upstream 2.0kb upstream 3452 true Chr06: 30726515-30729966 Phaseolus vulgaris
Phvul.006G214300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30726515-30728514 Phaseolus vulgaris
Phvul.006G214300 2.0kb downstream 2.0kb downstream 3452 true Chr06: 30728515-30731966 Phaseolus vulgaris
Phvul.006G214300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30729967-30731966 Phaseolus vulgaris
Phvul.006G214300 5.0kb upstream 5.0kb upstream 6452 true Chr06: 30723515-30729966 Phaseolus vulgaris
Phvul.006G214300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30723515-30728514 Phaseolus vulgaris
Phvul.006G214300 5.0kb downstream 5.0kb downstream 6452 true Chr06: 30728515-30734966 Phaseolus vulgaris
Phvul.006G214300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30729967-30734966 Phaseolus vulgaris
Phvul.006G214300 10.0kb upstream 10.0kb upstream 11452 true Chr06: 30718515-30729966 Phaseolus vulgaris
Phvul.006G214300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30718515-30728514 Phaseolus vulgaris
Phvul.006G214300 10.0kb downstream 10.0kb downstream 11452 true Chr06: 30728515-30739966 Phaseolus vulgaris
Phvul.006G214300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30729967-30739966 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303628 5265 Fabidae View MSA
124060809 5270 Rosid View MSA
123751909 5271 Pentapetalae View MSA
122785803 5272 Eudicot View MSA
122045845 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13432 0.0 7.97118    
cufflinks 1.86501 0.0 7.11838    
cufflinks 1.25417 0.0 8.70393    
cufflinks 1.19847 0.0 9.17123    
cufflinks 1.52848 0.0 6.23744    
cufflinks 2.16968 0.0 7.77771    
cufflinks 2.43234 0.0 14.357    
cufflinks 1.58975 0.0 6.32499    
cufflinks 2.81977 0.0 17.2897   High
cufflinks 0.325293 0.0 1.33338   Low
cufflinks 2.32263 0.0 14.3214    

0 Strain