Gene : Phvul.009G107900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10896//PTHR10896:SF27 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1114
Name:  ? Phvul.009G107900 Secondary Identifier:  ? PAC:37148606
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5800 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G107900 0.5kb upstream 0.5kb upstream 8110 true Chr09: 16731190-16739299 Phaseolus vulgaris
Phvul.009G107900 0.5kb upstream 0.5kb upstream 500 false Chr09: 16731190-16731689 Phaseolus vulgaris
Phvul.009G107900 0.5kb downstream 0.5kb downstream 8110 true Chr09: 16731690-16739799 Phaseolus vulgaris
Phvul.009G107900 0.5kb downstream 0.5kb downstream 500 false Chr09: 16739300-16739799 Phaseolus vulgaris
Phvul.009G107900 1.0kb upstream 1.0kb upstream 8610 true Chr09: 16730690-16739299 Phaseolus vulgaris
Phvul.009G107900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16730690-16731689 Phaseolus vulgaris
Phvul.009G107900 1.0kb downstream 1.0kb downstream 8610 true Chr09: 16731690-16740299 Phaseolus vulgaris
Phvul.009G107900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16739300-16740299 Phaseolus vulgaris
Phvul.009G107900 2.0kb upstream 2.0kb upstream 9610 true Chr09: 16729690-16739299 Phaseolus vulgaris
Phvul.009G107900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16729690-16731689 Phaseolus vulgaris
Phvul.009G107900 2.0kb downstream 2.0kb downstream 9610 true Chr09: 16731690-16741299 Phaseolus vulgaris
Phvul.009G107900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16739300-16741299 Phaseolus vulgaris
Phvul.009G107900 5.0kb upstream 5.0kb upstream 12610 true Chr09: 16726690-16739299 Phaseolus vulgaris
Phvul.009G107900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16726690-16731689 Phaseolus vulgaris
Phvul.009G107900 5.0kb downstream 5.0kb downstream 12610 true Chr09: 16731690-16744299 Phaseolus vulgaris
Phvul.009G107900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16739300-16744299 Phaseolus vulgaris
Phvul.009G107900 10.0kb upstream 10.0kb upstream 17610 true Chr09: 16721690-16739299 Phaseolus vulgaris
Phvul.009G107900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16721690-16731689 Phaseolus vulgaris
Phvul.009G107900 10.0kb downstream 10.0kb downstream 17610 true Chr09: 16731690-16749299 Phaseolus vulgaris
Phvul.009G107900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16739300-16749299 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308120 5265 Fabidae View MSA
124070512 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55578 0.0 8.04954   Low
cufflinks 3.6508 0.0 13.0617    
cufflinks 9.01672 0.0 30.4719   High
cufflinks 4.01843 0.0 16.5566    
cufflinks 3.85933 0.0 13.6007    
cufflinks 5.6246 0.0 21.0028    
cufflinks 4.84047 0.0 16.0377    
cufflinks 6.21311 0.0 22.5285    
cufflinks 7.6309 0.0 27.038   High
cufflinks 1.78577 0.0 7.89267   Low
cufflinks 2.88731 0.0 11.1154    

0 Strain