Gene : Phvul.009G096000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22595//PTHR22595:SF47 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  992
Name:  ? Phvul.009G096000 Secondary Identifier:  ? PAC:37150946
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G096000 0.5kb upstream 0.5kb upstream 1722 true Chr09: 15230931-15232652 Phaseolus vulgaris
Phvul.009G096000 0.5kb upstream 0.5kb upstream 500 false Chr09: 15230931-15231430 Phaseolus vulgaris
Phvul.009G096000 0.5kb downstream 0.5kb downstream 1722 true Chr09: 15231431-15233152 Phaseolus vulgaris
Phvul.009G096000 0.5kb downstream 0.5kb downstream 500 false Chr09: 15232653-15233152 Phaseolus vulgaris
Phvul.009G096000 1.0kb upstream 1.0kb upstream 2222 true Chr09: 15230431-15232652 Phaseolus vulgaris
Phvul.009G096000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 15230431-15231430 Phaseolus vulgaris
Phvul.009G096000 1.0kb downstream 1.0kb downstream 2222 true Chr09: 15231431-15233652 Phaseolus vulgaris
Phvul.009G096000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 15232653-15233652 Phaseolus vulgaris
Phvul.009G096000 2.0kb upstream 2.0kb upstream 3222 true Chr09: 15229431-15232652 Phaseolus vulgaris
Phvul.009G096000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 15229431-15231430 Phaseolus vulgaris
Phvul.009G096000 2.0kb downstream 2.0kb downstream 3222 true Chr09: 15231431-15234652 Phaseolus vulgaris
Phvul.009G096000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 15232653-15234652 Phaseolus vulgaris
Phvul.009G096000 5.0kb upstream 5.0kb upstream 6222 true Chr09: 15226431-15232652 Phaseolus vulgaris
Phvul.009G096000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 15226431-15231430 Phaseolus vulgaris
Phvul.009G096000 5.0kb downstream 5.0kb downstream 6222 true Chr09: 15231431-15237652 Phaseolus vulgaris
Phvul.009G096000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 15232653-15237652 Phaseolus vulgaris
Phvul.009G096000 10.0kb upstream 10.0kb upstream 11222 true Chr09: 15221431-15232652 Phaseolus vulgaris
Phvul.009G096000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 15221431-15231430 Phaseolus vulgaris
Phvul.009G096000 10.0kb downstream 10.0kb downstream 11222 true Chr09: 15231431-15242652 Phaseolus vulgaris
Phvul.009G096000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 15232653-15242652 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302197 5265 Fabidae View MSA
124070009 5270 Rosid View MSA
123742328 5271 Pentapetalae View MSA
122795225 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.97693 0.0 13.119   High
cufflinks 0.247817 0.0 1.05065 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.266377 0.0 1.11333 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.137938 0.0 0.619064 Low Low
cufflinks 0.760436 0.0 2.94185    
cufflinks 0.176772 0.0 0.774026 Low Low
cufflinks 1.10167 0.0 4.14666    
cufflinks 1.56986 0.0 5.73462    
cufflinks 0.852576 0.0 3.27479    

0 Strain