Gene : Phvul.006G201900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR18937//PTHR18937:SF264 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  2032
Name:  ? Phvul.006G201900 Secondary Identifier:  ? PAC:37171861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G201900 0.5kb upstream 0.5kb upstream 4593 true Chr06: 29830027-29834619 Phaseolus vulgaris
Phvul.006G201900 0.5kb upstream 0.5kb upstream 500 false Chr06: 29830027-29830526 Phaseolus vulgaris
Phvul.006G201900 0.5kb downstream 0.5kb downstream 4593 true Chr06: 29830527-29835119 Phaseolus vulgaris
Phvul.006G201900 0.5kb downstream 0.5kb downstream 500 false Chr06: 29834620-29835119 Phaseolus vulgaris
Phvul.006G201900 1.0kb upstream 1.0kb upstream 5093 true Chr06: 29829527-29834619 Phaseolus vulgaris
Phvul.006G201900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29829527-29830526 Phaseolus vulgaris
Phvul.006G201900 1.0kb downstream 1.0kb downstream 5093 true Chr06: 29830527-29835619 Phaseolus vulgaris
Phvul.006G201900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29834620-29835619 Phaseolus vulgaris
Phvul.006G201900 2.0kb upstream 2.0kb upstream 6093 true Chr06: 29828527-29834619 Phaseolus vulgaris
Phvul.006G201900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29828527-29830526 Phaseolus vulgaris
Phvul.006G201900 2.0kb downstream 2.0kb downstream 6093 true Chr06: 29830527-29836619 Phaseolus vulgaris
Phvul.006G201900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29834620-29836619 Phaseolus vulgaris
Phvul.006G201900 5.0kb upstream 5.0kb upstream 9093 true Chr06: 29825527-29834619 Phaseolus vulgaris
Phvul.006G201900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29825527-29830526 Phaseolus vulgaris
Phvul.006G201900 5.0kb downstream 5.0kb downstream 9093 true Chr06: 29830527-29839619 Phaseolus vulgaris
Phvul.006G201900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29834620-29839619 Phaseolus vulgaris
Phvul.006G201900 10.0kb upstream 10.0kb upstream 14093 true Chr06: 29820527-29834619 Phaseolus vulgaris
Phvul.006G201900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29820527-29830526 Phaseolus vulgaris
Phvul.006G201900 10.0kb downstream 10.0kb downstream 14093 true Chr06: 29830527-29844619 Phaseolus vulgaris
Phvul.006G201900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29834620-29844619 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122307170 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.438754 0.0 1.50081    
cufflinks 3.05187 0.0 8.43871    
cufflinks 1.15674 0.0 3.53511    
cufflinks 0.375437 0.0 1.32425 Low  
cufflinks 1.52784 0.0 4.59001    
cufflinks 4.34733 0.0 11.6598    
cufflinks 2.51739 0.0 7.06292    
cufflinks 1.71788 0.0 4.98349    
cufflinks 3.73919 0.0 10.1486    
cufflinks 0.037267 0.0 0.157992 Low Low
cufflinks 1.54308 0.0 4.59614    

0 Strain