Gene : Phvul.006G202100 P. vulgaris v2.1
Defline:  (1 of 2) K08596 - sentrin-specific protease 7 [EC:3.4.22.68] (SENP7) Genomic Order:  2034
Name:  ? Phvul.006G202100 Secondary Identifier:  ? PAC:37172920
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G202100 0.5kb upstream 0.5kb upstream 9599 true Chr06: 29836775-29846373 Phaseolus vulgaris
Phvul.006G202100 0.5kb upstream 0.5kb upstream 500 false Chr06: 29845874-29846373 Phaseolus vulgaris
Phvul.006G202100 0.5kb downstream 0.5kb downstream 9599 true Chr06: 29836275-29845873 Phaseolus vulgaris
Phvul.006G202100 0.5kb downstream 0.5kb downstream 500 false Chr06: 29836275-29836774 Phaseolus vulgaris
Phvul.006G202100 1.0kb upstream 1.0kb upstream 10099 true Chr06: 29836775-29846873 Phaseolus vulgaris
Phvul.006G202100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29845874-29846873 Phaseolus vulgaris
Phvul.006G202100 1.0kb downstream 1.0kb downstream 10099 true Chr06: 29835775-29845873 Phaseolus vulgaris
Phvul.006G202100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29835775-29836774 Phaseolus vulgaris
Phvul.006G202100 2.0kb upstream 2.0kb upstream 11099 true Chr06: 29836775-29847873 Phaseolus vulgaris
Phvul.006G202100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29845874-29847873 Phaseolus vulgaris
Phvul.006G202100 2.0kb downstream 2.0kb downstream 11099 true Chr06: 29834775-29845873 Phaseolus vulgaris
Phvul.006G202100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29834775-29836774 Phaseolus vulgaris
Phvul.006G202100 5.0kb upstream 5.0kb upstream 14099 true Chr06: 29836775-29850873 Phaseolus vulgaris
Phvul.006G202100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29845874-29850873 Phaseolus vulgaris
Phvul.006G202100 5.0kb downstream 5.0kb downstream 14099 true Chr06: 29831775-29845873 Phaseolus vulgaris
Phvul.006G202100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29831775-29836774 Phaseolus vulgaris
Phvul.006G202100 10.0kb upstream 10.0kb upstream 19099 true Chr06: 29836775-29855873 Phaseolus vulgaris
Phvul.006G202100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29845874-29855873 Phaseolus vulgaris
Phvul.006G202100 10.0kb downstream 10.0kb downstream 19099 true Chr06: 29826775-29845873 Phaseolus vulgaris
Phvul.006G202100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29826775-29836774 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296795 5265 Fabidae View MSA
124038183 5270 Rosid View MSA
123752734 5271 Pentapetalae View MSA
122792289 5272 Eudicot View MSA
122048502 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121351341 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.21427 0.0 9.85735    
cufflinks 2.9023 0.0 15.5981    
cufflinks 2.29779 0.0 11.1899    
cufflinks 1.70996 0.0 9.40565   Low
cufflinks 2.80835 0.0 11.7456    
cufflinks 2.19909 0.0 8.12435    
cufflinks 5.92535 0.0 28.4454   High
cufflinks 4.83319 0.0 24.8686    
cufflinks 4.29164 0.0 18.1894    
cufflinks 6.28264 0.0 29.4682   High
cufflinks 2.43014 0.0 9.038    

0 Strain