Gene : Phvul.009G095400 P. vulgaris v2.1
Defline:  (1 of 4) K07936 - GTP-binding nuclear protein Ran (RAN) Genomic Order:  986
Name:  ? Phvul.009G095400 Secondary Identifier:  ? PAC:37150504
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ILEUDEG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5136 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5138 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6435 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  
Pvulgaris VALDEG-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G095400 0.5kb upstream 0.5kb upstream 3205 true Chr09: 15180312-15183516 Phaseolus vulgaris
Phvul.009G095400 0.5kb upstream 0.5kb upstream 500 false Chr09: 15183017-15183516 Phaseolus vulgaris
Phvul.009G095400 0.5kb downstream 0.5kb downstream 3205 true Chr09: 15179812-15183016 Phaseolus vulgaris
Phvul.009G095400 0.5kb downstream 0.5kb downstream 500 false Chr09: 15179812-15180311 Phaseolus vulgaris
Phvul.009G095400 1.0kb upstream 1.0kb upstream 3705 true Chr09: 15180312-15184016 Phaseolus vulgaris
Phvul.009G095400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 15183017-15184016 Phaseolus vulgaris
Phvul.009G095400 1.0kb downstream 1.0kb downstream 3705 true Chr09: 15179312-15183016 Phaseolus vulgaris
Phvul.009G095400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 15179312-15180311 Phaseolus vulgaris
Phvul.009G095400 2.0kb upstream 2.0kb upstream 4705 true Chr09: 15180312-15185016 Phaseolus vulgaris
Phvul.009G095400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 15183017-15185016 Phaseolus vulgaris
Phvul.009G095400 2.0kb downstream 2.0kb downstream 4705 true Chr09: 15178312-15183016 Phaseolus vulgaris
Phvul.009G095400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 15178312-15180311 Phaseolus vulgaris
Phvul.009G095400 5.0kb upstream 5.0kb upstream 7705 true Chr09: 15180312-15188016 Phaseolus vulgaris
Phvul.009G095400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 15183017-15188016 Phaseolus vulgaris
Phvul.009G095400 5.0kb downstream 5.0kb downstream 7705 true Chr09: 15175312-15183016 Phaseolus vulgaris
Phvul.009G095400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 15175312-15180311 Phaseolus vulgaris
Phvul.009G095400 10.0kb upstream 10.0kb upstream 12705 true Chr09: 15180312-15193016 Phaseolus vulgaris
Phvul.009G095400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 15183017-15193016 Phaseolus vulgaris
Phvul.009G095400 10.0kb downstream 10.0kb downstream 12705 true Chr09: 15170312-15183016 Phaseolus vulgaris
Phvul.009G095400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 15170312-15180311 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312844 5265 Fabidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 170.642 0.0 478.994 High  
cufflinks 133.278 0.0 364.492 High  
cufflinks 108.499 0.0 291.561 High Low
cufflinks 270.196 0.0 798.547 High High
cufflinks 188.609 0.0 533.223 High  
cufflinks 88.2449 0.0 233.283 High Low
cufflinks 142.204 0.0 391.564 High  
cufflinks 148.498 0.0 411.922 High  
cufflinks 156.267 0.0 433.733 High  
cufflinks 131.98 0.0 360.077 High  
cufflinks 223.254 0.0 644.389 High High

0 Strain