Gene : Phvul.006G208200 P. vulgaris v2.1
Defline:  (1 of 2) K15920 - beta-D-xylosidase 4 (XYL4) Genomic Order:  2098
Name:  ? Phvul.006G208200 Secondary Identifier:  ? PAC:37173553
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G208200 0.5kb upstream 0.5kb upstream 5124 true Chr06: 30281012-30286135 Phaseolus vulgaris
Phvul.006G208200 0.5kb upstream 0.5kb upstream 500 false Chr06: 30281012-30281511 Phaseolus vulgaris
Phvul.006G208200 0.5kb downstream 0.5kb downstream 5124 true Chr06: 30281512-30286635 Phaseolus vulgaris
Phvul.006G208200 0.5kb downstream 0.5kb downstream 500 false Chr06: 30286136-30286635 Phaseolus vulgaris
Phvul.006G208200 1.0kb upstream 1.0kb upstream 5624 true Chr06: 30280512-30286135 Phaseolus vulgaris
Phvul.006G208200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30280512-30281511 Phaseolus vulgaris
Phvul.006G208200 1.0kb downstream 1.0kb downstream 5624 true Chr06: 30281512-30287135 Phaseolus vulgaris
Phvul.006G208200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30286136-30287135 Phaseolus vulgaris
Phvul.006G208200 2.0kb upstream 2.0kb upstream 6624 true Chr06: 30279512-30286135 Phaseolus vulgaris
Phvul.006G208200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30279512-30281511 Phaseolus vulgaris
Phvul.006G208200 2.0kb downstream 2.0kb downstream 6624 true Chr06: 30281512-30288135 Phaseolus vulgaris
Phvul.006G208200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30286136-30288135 Phaseolus vulgaris
Phvul.006G208200 5.0kb upstream 5.0kb upstream 9624 true Chr06: 30276512-30286135 Phaseolus vulgaris
Phvul.006G208200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30276512-30281511 Phaseolus vulgaris
Phvul.006G208200 5.0kb downstream 5.0kb downstream 9624 true Chr06: 30281512-30291135 Phaseolus vulgaris
Phvul.006G208200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30286136-30291135 Phaseolus vulgaris
Phvul.006G208200 10.0kb upstream 10.0kb upstream 14624 true Chr06: 30271512-30286135 Phaseolus vulgaris
Phvul.006G208200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30271512-30281511 Phaseolus vulgaris
Phvul.006G208200 10.0kb downstream 10.0kb downstream 14624 true Chr06: 30281512-30296135 Phaseolus vulgaris
Phvul.006G208200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30286136-30296135 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315174 5265 Fabidae View MSA
124062868 5270 Rosid View MSA
123737560 5271 Pentapetalae View MSA
122787733 5272 Eudicot View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.0299 0.0 157.087 High  
cufflinks 15.7483 0.0 40.7167    
cufflinks 46.6657 0.0 128.554 High  
cufflinks 49.5621 0.0 136.524 High  
cufflinks 39.5444 0.0 106.877 High  
cufflinks 61.4611 0.0 174.171 High  
cufflinks 29.5842 0.0 78.4271 High  
cufflinks 23.4535 0.0 61.3365    
cufflinks 44.149 0.0 120.938 High  
cufflinks 3.8523 0.0 10.7319   Low
cufflinks 43.7964 0.0 119.471 High  

0 Strain