Gene : Phvul.009G222900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Genomic Order:  2280
Name:  ? Phvul.009G222900 Secondary Identifier:  ? PAC:37151167
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G222900 0.5kb upstream 0.5kb upstream 6796 true Chr09: 33605599-33612394 Phaseolus vulgaris
Phvul.009G222900 0.5kb upstream 0.5kb upstream 500 false Chr09: 33611895-33612394 Phaseolus vulgaris
Phvul.009G222900 0.5kb downstream 0.5kb downstream 6796 true Chr09: 33605099-33611894 Phaseolus vulgaris
Phvul.009G222900 0.5kb downstream 0.5kb downstream 500 false Chr09: 33605099-33605598 Phaseolus vulgaris
Phvul.009G222900 1.0kb upstream 1.0kb upstream 7296 true Chr09: 33605599-33612894 Phaseolus vulgaris
Phvul.009G222900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33611895-33612894 Phaseolus vulgaris
Phvul.009G222900 1.0kb downstream 1.0kb downstream 7296 true Chr09: 33604599-33611894 Phaseolus vulgaris
Phvul.009G222900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33604599-33605598 Phaseolus vulgaris
Phvul.009G222900 2.0kb upstream 2.0kb upstream 8296 true Chr09: 33605599-33613894 Phaseolus vulgaris
Phvul.009G222900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33611895-33613894 Phaseolus vulgaris
Phvul.009G222900 2.0kb downstream 2.0kb downstream 8296 true Chr09: 33603599-33611894 Phaseolus vulgaris
Phvul.009G222900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33603599-33605598 Phaseolus vulgaris
Phvul.009G222900 5.0kb upstream 5.0kb upstream 11296 true Chr09: 33605599-33616894 Phaseolus vulgaris
Phvul.009G222900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33611895-33616894 Phaseolus vulgaris
Phvul.009G222900 5.0kb downstream 5.0kb downstream 11296 true Chr09: 33600599-33611894 Phaseolus vulgaris
Phvul.009G222900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33600599-33605598 Phaseolus vulgaris
Phvul.009G222900 10.0kb upstream 10.0kb upstream 16296 true Chr09: 33605599-33621894 Phaseolus vulgaris
Phvul.009G222900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33611895-33621894 Phaseolus vulgaris
Phvul.009G222900 10.0kb downstream 10.0kb downstream 16296 true Chr09: 33595599-33611894 Phaseolus vulgaris
Phvul.009G222900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33595599-33605598 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301300 5265 Fabidae View MSA
124065046 5270 Rosid View MSA
123736440 5271 Pentapetalae View MSA
122793822 5272 Eudicot View MSA
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.21394 0.0 17.3596   Low
cufflinks 5.16258 0.0 25.7681    
cufflinks 6.21124 0.0 35.0804    
cufflinks 2.61622 0.0 12.7303   Low
cufflinks 8.8654 0.0 39.3772   High
cufflinks 5.46205 0.0 23.8046    
cufflinks 4.85244 0.0 21.0829    
cufflinks 4.10716 0.0 24.3815    
cufflinks 3.34637 0.0 19.8429    
cufflinks 6.64913 0.0 31.8923    
cufflinks 4.27887 0.0 18.38    

0 Strain