Gene : Phvul.009G221700 P. vulgaris v2.1
Defline:  (1 of 3) K02881 - large subunit ribosomal protein L18 (RP-L18, MRPL18, rplR) Genomic Order:  2268
Name:  ? Phvul.009G221700 Secondary Identifier:  ? PAC:37150726
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G221700 0.5kb upstream 0.5kb upstream 3138 true Chr09: 33437944-33441081 Phaseolus vulgaris
Phvul.009G221700 0.5kb upstream 0.5kb upstream 500 false Chr09: 33437944-33438443 Phaseolus vulgaris
Phvul.009G221700 0.5kb downstream 0.5kb downstream 3138 true Chr09: 33438444-33441581 Phaseolus vulgaris
Phvul.009G221700 0.5kb downstream 0.5kb downstream 500 false Chr09: 33441082-33441581 Phaseolus vulgaris
Phvul.009G221700 1.0kb upstream 1.0kb upstream 3638 true Chr09: 33437444-33441081 Phaseolus vulgaris
Phvul.009G221700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33437444-33438443 Phaseolus vulgaris
Phvul.009G221700 1.0kb downstream 1.0kb downstream 3638 true Chr09: 33438444-33442081 Phaseolus vulgaris
Phvul.009G221700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33441082-33442081 Phaseolus vulgaris
Phvul.009G221700 2.0kb upstream 2.0kb upstream 4638 true Chr09: 33436444-33441081 Phaseolus vulgaris
Phvul.009G221700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33436444-33438443 Phaseolus vulgaris
Phvul.009G221700 2.0kb downstream 2.0kb downstream 4638 true Chr09: 33438444-33443081 Phaseolus vulgaris
Phvul.009G221700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33441082-33443081 Phaseolus vulgaris
Phvul.009G221700 5.0kb upstream 5.0kb upstream 7638 true Chr09: 33433444-33441081 Phaseolus vulgaris
Phvul.009G221700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33433444-33438443 Phaseolus vulgaris
Phvul.009G221700 5.0kb downstream 5.0kb downstream 7638 true Chr09: 33438444-33446081 Phaseolus vulgaris
Phvul.009G221700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33441082-33446081 Phaseolus vulgaris
Phvul.009G221700 10.0kb upstream 10.0kb upstream 12638 true Chr09: 33428444-33441081 Phaseolus vulgaris
Phvul.009G221700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33428444-33438443 Phaseolus vulgaris
Phvul.009G221700 10.0kb downstream 10.0kb downstream 12638 true Chr09: 33438444-33451081 Phaseolus vulgaris
Phvul.009G221700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33441082-33451081 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303707 5265 Fabidae View MSA
124064219 5270 Rosid View MSA
123746158 5271 Pentapetalae View MSA
122789168 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.1833 0.0 117.803 High  
cufflinks 83.4873 0.0 216.122 High  
cufflinks 418.662 0.0 1244.85 High High
cufflinks 51.3431 0.0 133.211 High  
cufflinks 46.4793 0.0 121.013 High  
cufflinks 279.603 0.0 789.408 High High
cufflinks 6.00055 0.0 18.7102   Low
cufflinks 9.13876 0.0 27.2574   Low
cufflinks 9.60473 0.0 28.3823   Low
cufflinks 15.0852 0.0 42.871    
cufflinks 34.8898 0.0 92.1726 High  

0 Strain