Gene : Phvul.009G226100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23423:SF10 - TRANSMEMBRANE PROTEIN 184C Genomic Order:  2310
Name:  ? Phvul.009G226100 Secondary Identifier:  ? PAC:37151742
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G226100 0.5kb upstream 0.5kb upstream 7385 true Chr09: 34052739-34060123 Phaseolus vulgaris
Phvul.009G226100 0.5kb upstream 0.5kb upstream 500 false Chr09: 34052739-34053238 Phaseolus vulgaris
Phvul.009G226100 0.5kb downstream 0.5kb downstream 7385 true Chr09: 34053239-34060623 Phaseolus vulgaris
Phvul.009G226100 0.5kb downstream 0.5kb downstream 500 false Chr09: 34060124-34060623 Phaseolus vulgaris
Phvul.009G226100 1.0kb upstream 1.0kb upstream 7885 true Chr09: 34052239-34060123 Phaseolus vulgaris
Phvul.009G226100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34052239-34053238 Phaseolus vulgaris
Phvul.009G226100 1.0kb downstream 1.0kb downstream 7885 true Chr09: 34053239-34061123 Phaseolus vulgaris
Phvul.009G226100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34060124-34061123 Phaseolus vulgaris
Phvul.009G226100 2.0kb upstream 2.0kb upstream 8885 true Chr09: 34051239-34060123 Phaseolus vulgaris
Phvul.009G226100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34051239-34053238 Phaseolus vulgaris
Phvul.009G226100 2.0kb downstream 2.0kb downstream 8885 true Chr09: 34053239-34062123 Phaseolus vulgaris
Phvul.009G226100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34060124-34062123 Phaseolus vulgaris
Phvul.009G226100 5.0kb upstream 5.0kb upstream 11885 true Chr09: 34048239-34060123 Phaseolus vulgaris
Phvul.009G226100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34048239-34053238 Phaseolus vulgaris
Phvul.009G226100 5.0kb downstream 5.0kb downstream 11885 true Chr09: 34053239-34065123 Phaseolus vulgaris
Phvul.009G226100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34060124-34065123 Phaseolus vulgaris
Phvul.009G226100 10.0kb upstream 10.0kb upstream 16885 true Chr09: 34043239-34060123 Phaseolus vulgaris
Phvul.009G226100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34043239-34053238 Phaseolus vulgaris
Phvul.009G226100 10.0kb downstream 10.0kb downstream 16885 true Chr09: 34053239-34070123 Phaseolus vulgaris
Phvul.009G226100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34060124-34070123 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026542 5273 Angiosperm View MSA
122303232 5265 Fabidae View MSA
124062149 5270 Rosid View MSA
123738918 5271 Pentapetalae View MSA
122786348 5272 Eudicot View MSA
121296376 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.828439 0.0 4.96549    
cufflinks 1.85592 0.0 6.48816   High
cufflinks 0.69018 0.0 2.84646    
cufflinks 0.310066 0.0 2.83772 Low Low
cufflinks 0.984047 0.0 3.84283    
cufflinks 0.54831 0.0 2.92922 Low  
cufflinks 0.429969 0.0 2.20428 Low  
cufflinks 0.55603 0.0 2.67874    
cufflinks 0.330756 0.0 1.84081 Low Low
cufflinks 1.81828 0.0 6.7769   High
cufflinks 0.85588 0.0 3.95898    

0 Strain